Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_J02
(590 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC094839-1|AAH94839.1| 352|Homo sapiens ADP-ribosylation-like f... 51 3e-06
BC015909-1|AAH15909.2| 360|Homo sapiens ADP-ribosylation-like f... 51 3e-06
BC015569-1|AAH15569.1| 215|Homo sapiens ARL6IP4 protein protein. 51 3e-06
BC001958-1|AAH01958.1| 218|Homo sapiens ARL6IP4 protein protein. 51 3e-06
AK074098-1|BAB84924.1| 432|Homo sapiens FLJ00169 protein protein. 51 3e-06
AB035384-1|BAA94744.1| 218|Homo sapiens SRp25 nuclear protein p... 51 3e-06
DQ099385-1|AAZ13761.1| 181|Homo sapiens ADP-ribosylation-like f... 35 0.25
U58994-1|AAD10849.1| 407|Homo sapiens ladinin protein. 31 3.0
U42408-1|AAB58817.1| 517|Homo sapiens ladinin protein. 31 3.0
BC071890-1|AAH71890.1| 517|Homo sapiens ladinin 1 protein. 31 3.0
BC009742-1|AAH09742.1| 517|Homo sapiens ladinin 1 protein. 31 3.0
BC034394-1|AAH34394.1| 322|Homo sapiens hypothetical protein MG... 31 4.0
>BC094839-1|AAH94839.1| 352|Homo sapiens ADP-ribosylation-like
factor 6 interacting protein 4 protein.
Length = 352
Score = 51.2 bits (117), Expect = 3e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +1
Query: 352 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRL 444
+AM PMTKEEW+ +QSIIR+V+D ETGR RL
Sbjct: 282 QAMKPMTKEEWDARQSIIRKVVDPETGRTRL 312
>BC015909-1|AAH15909.2| 360|Homo sapiens ADP-ribosylation-like
factor 6 interacting protein 4 protein.
Length = 360
Score = 51.2 bits (117), Expect = 3e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +1
Query: 352 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRL 444
+AM PMTKEEW+ +QSIIR+V+D ETGR RL
Sbjct: 290 QAMKPMTKEEWDARQSIIRKVVDPETGRTRL 320
>BC015569-1|AAH15569.1| 215|Homo sapiens ARL6IP4 protein protein.
Length = 215
Score = 51.2 bits (117), Expect = 3e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +1
Query: 352 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRL 444
+AM PMTKEEW+ +QSIIR+V+D ETGR RL
Sbjct: 148 QAMKPMTKEEWDARQSIIRKVVDPETGRTRL 178
>BC001958-1|AAH01958.1| 218|Homo sapiens ARL6IP4 protein protein.
Length = 218
Score = 51.2 bits (117), Expect = 3e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +1
Query: 352 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRL 444
+AM PMTKEEW+ +QSIIR+V+D ETGR RL
Sbjct: 148 QAMKPMTKEEWDARQSIIRKVVDPETGRTRL 178
>AK074098-1|BAB84924.1| 432|Homo sapiens FLJ00169 protein protein.
Length = 432
Score = 51.2 bits (117), Expect = 3e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +1
Query: 352 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRL 444
+AM PMTKEEW+ +QSIIR+V+D ETGR RL
Sbjct: 365 QAMKPMTKEEWDARQSIIRKVVDPETGRTRL 395
>AB035384-1|BAA94744.1| 218|Homo sapiens SRp25 nuclear protein
protein.
Length = 218
Score = 51.2 bits (117), Expect = 3e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +1
Query: 352 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRL 444
+AM PMTKEEW+ +QSIIR+V+D ETGR RL
Sbjct: 148 QAMKPMTKEEWDARQSIIRKVVDPETGRTRL 178
>DQ099385-1|AAZ13761.1| 181|Homo sapiens ADP-ribosylation-like
factor 6 interacting protein 4 protein.
Length = 181
Score = 34.7 bits (76), Expect = 0.25
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 352 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRL 444
K + KE+ E +QSIIR+V+D ETGR RL
Sbjct: 111 KKLKKKGKEKAEAQQSIIRKVVDPETGRTRL 141
>U58994-1|AAD10849.1| 407|Homo sapiens ladinin protein.
Length = 407
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 286 SQSRDKSPEVSADIP-VELMEISKAMAPMTKEEWEKKQSIIR 408
SQ+ D+ S +P VE E+ K + P +K+E E QSI+R
Sbjct: 49 SQNGDRQASASERLPSVEEAEVPKPLPPASKDEDEDIQSILR 90
>U42408-1|AAB58817.1| 517|Homo sapiens ladinin protein.
Length = 517
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 286 SQSRDKSPEVSADIP-VELMEISKAMAPMTKEEWEKKQSIIR 408
SQ+ D+ S +P VE E+ K + P +K+E E QSI+R
Sbjct: 49 SQNGDRQASASERLPSVEEAEVPKPLPPASKDEDEDIQSILR 90
>BC071890-1|AAH71890.1| 517|Homo sapiens ladinin 1 protein.
Length = 517
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 286 SQSRDKSPEVSADIP-VELMEISKAMAPMTKEEWEKKQSIIR 408
SQ+ D+ S +P VE E+ K + P +K+E E QSI+R
Sbjct: 49 SQNGDRQASASERLPSVEEAEVPKPLPPASKDEDEDIQSILR 90
>BC009742-1|AAH09742.1| 517|Homo sapiens ladinin 1 protein.
Length = 517
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 286 SQSRDKSPEVSADIP-VELMEISKAMAPMTKEEWEKKQSIIR 408
SQ+ D+ S +P VE E+ K + P +K+E E QSI+R
Sbjct: 49 SQNGDRQASASERLPSVEEAEVPKPLPPASKDEDEDIQSILR 90
>BC034394-1|AAH34394.1| 322|Homo sapiens hypothetical protein
MGC34821 protein.
Length = 322
Score = 30.7 bits (66), Expect = 4.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 434 LPVSSSNTLLIMLCFFSHSSFVIGAMAFEI 345
LP S S T++++LC +S ++G +AF I
Sbjct: 226 LPRSRSMTIMVLLCSYSVGQMLLGGLAFAI 255
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,757,670
Number of Sequences: 237096
Number of extensions: 632243
Number of successful extensions: 1431
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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