Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_I22
         (831 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    27   0.14 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    24   1.3  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   3.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.1  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +2

Query: 182 EIPGLLYTCLEVEHLYLHKNKISIFPVEXXXXXXXXXXXXXXXXXXXXPTEI-GNLKNLV 358
           EI GL +  LE   L+L+ + +S+  V                       E+ GN+ +L 
Sbjct: 434 EINGLSFQGLEYTLLHLNLDNVSLSQVPALSTPNLLSLSLAFNSLPTVALEVAGNISSLR 493

Query: 359 NLNLSYNPLNVL 394
            LNL YN L+ +
Sbjct: 494 YLNLDYNDLSAV 505



 Score = 24.6 bits (51), Expect = 0.97
 Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
 Frame = +2

Query: 470 EIG-KLTQLDTFGARGNELKTIPEEMTS-LAKLRWLTLENNQIETLPD-TMDRMTALVHC 640
           +IG  L  L    A  + ++  P +    L +L  L L NN++  +PD +   + +L   
Sbjct: 12  DIGDSLLTLKLTHALSSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHFLRSLKKV 71

Query: 641 NLRNNRLEQFPSSILK---CKELMFLQLNSNQISSVPANLDTSLVPGLXMIDLRSNPI 805
           +L++N +E       +    ++L  +  + N + +V  +    L+  L  I L  N I
Sbjct: 72  HLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVRNVQQHTFADLIQ-LEQIHLDDNRI 128


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = +2

Query: 455 KEIPKEIGKLTQLDTFGARGNELKTIPEEMTSL---AKLR 565
           +  P E+ +L  +  FGA  ++    PE++T+L   AKLR
Sbjct: 257 QSFPLELPQLPNMTKFGAYSSDKIYHPEDITNLLGYAKLR 296


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 431 TLPASPDHRFPGSKHL 384
           T P  P+H   GSKHL
Sbjct: 70  TSPYPPNHPLSGSKHL 85


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 561 NLARLVISSGIVFSSFPLAPK 499
           NL RL+++ G  F+  P  PK
Sbjct: 5   NLLRLIVTIGEFFAMTPSRPK 25


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 473 IGKLTQLDTFGARGNELKTIPEEMTSL 553
           +  LT +  F  R N+LKT+   + S+
Sbjct: 119 LAMLTSMVMFYKRSNDLKTLLSNLESI 145


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 473 IGKLTQLDTFGARGNELKTIPEEMTSL 553
           +  LT +  F  R N+LKT+   + S+
Sbjct: 75  LAMLTSMVMFYKRSNDLKTLLSNLESI 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,087
Number of Sequences: 336
Number of extensions: 2872
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)