Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_I22
(831 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 54 3e-08
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 51 2e-07
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 50 5e-07
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 48 2e-06
SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma c... 27 2.5
SPAC26H5.07c |||seven transmembrane receptor-like protein|Schizo... 26 7.5
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 26 7.5
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 25 10.0
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 53.6 bits (123), Expect = 3e-08
Identities = 30/100 (30%), Positives = 49/100 (49%)
Frame = +2
Query: 452 LKEIPKEIGKLTQLDTFGARGNELKTIPEEMTSLAKLRWLTLENNQIETLPDTMDRMTAL 631
+K I EI K T+L R N L+ PE + L L L + N+I+ LP++ + L
Sbjct: 64 IKSIGPEILKFTRLRYLNIRSNVLREFPESLCRLESLEILDISRNKIKQLPESFGALMNL 123
Query: 632 VHCNLRNNRLEQFPSSILKCKELMFLQLNSNQISSVPANL 751
++ NRL + P+ I L L++ +N I P ++
Sbjct: 124 KVLSISKNRLFELPTYIAHMPNLEILKIENNHIVFPPPHI 163
Score = 45.2 bits (102), Expect = 1e-05
Identities = 26/103 (25%), Positives = 48/103 (46%)
Frame = +2
Query: 353 LVNLNLSYNPLNVLIPEIGDLEKLEAFWCNRIGLKEIPKEIGKLTQLDTFGARGNELKTI 532
+ L L +N + + PEI +L L+E P+ + +L L+ N++K +
Sbjct: 54 IARLALGHNFIKSIGPEILKFTRLRYLNIRSNVLREFPESLCRLESLEILDISRNKIKQL 113
Query: 533 PEEMTSLAKLRWLTLENNQIETLPDTMDRMTALVHCNLRNNRL 661
PE +L L+ L++ N++ LP + M L + NN +
Sbjct: 114 PESFGALMNLKVLSISKNRLFELPTYIAHMPNLEILKIENNHI 156
Score = 42.7 bits (96), Expect = 6e-05
Identities = 25/100 (25%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +2
Query: 521 LKTIPEEMTSL--AKLRWLTLENNQIETLPDTMDRMTALVHCNLRNNRLEQFPSSILKCK 694
L+ +P E ++ L L +N I+++ + + T L + N+R+N L +FP S+ + +
Sbjct: 39 LRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRSNVLREFPESLCRLE 98
Query: 695 ELMFLQLNSNQISSVPANLDTSLVPGLXMIDLRSNPICEL 814
L L ++ N+I +P + + L ++ + N + EL
Sbjct: 99 SLEILDISRNKIKQLPESFGALM--NLKVLSISKNRLFEL 136
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 51.2 bits (117), Expect = 2e-07
Identities = 28/81 (34%), Positives = 40/81 (49%)
Frame = +2
Query: 422 LEAFWCNRIGLKEIPKEIGKLTQLDTFGARGNELKTIPEEMTSLAKLRWLTLENNQIETL 601
L + N L +P EIGKL L A GN +KTIP E+ L +LR + L +N I +
Sbjct: 183 LTELYINHNNLTRLPPEIGKLKNLVILDASGNSIKTIPPELGLLTELREVLLFDNMISVI 242
Query: 602 PDTMDRMTALVHCNLRNNRLE 664
P + + L + N L+
Sbjct: 243 PAELGTLFQLKILGIEGNPLQ 263
Score = 50.0 bits (114), Expect = 4e-07
Identities = 29/89 (32%), Positives = 47/89 (52%)
Frame = +2
Query: 329 TEIGNLKNLVNLNLSYNPLNVLIPEIGDLEKLEAFWCNRIGLKEIPKEIGKLTQLDTFGA 508
T++ L L +++N L L PEIG L+ L + +K IP E+G LT+L
Sbjct: 175 TDLFKFSFLTELYINHNNLTRLPPEIGKLKNLVILDASGNSIKTIPPELGLLTELREVLL 234
Query: 509 RGNELKTIPEEMTSLAKLRWLTLENNQIE 595
N + IP E+ +L +L+ L +E N ++
Sbjct: 235 FDNMISVIPAELGTLFQLKILGIEGNPLQ 263
Score = 50.0 bits (114), Expect = 4e-07
Identities = 28/69 (40%), Positives = 37/69 (53%)
Frame = +2
Query: 326 PTEIGNLKNLVNLNLSYNPLNVLIPEIGDLEKLEAFWCNRIGLKEIPKEIGKLTQLDTFG 505
P EIG LKNLV L+ S N + + PE+G L +L + IP E+G L QL G
Sbjct: 197 PPEIGKLKNLVILDASGNSIKTIPPELGLLTELREVLLFDNMISVIPAELGTLFQLKILG 256
Query: 506 ARGNELKTI 532
GN L+ +
Sbjct: 257 IEGNPLQDV 265
Score = 29.5 bits (63), Expect = 0.61
Identities = 23/105 (21%), Positives = 42/105 (40%)
Frame = +2
Query: 155 LSLNGFEITEIPGLLYTCLEVEHLYLHKNKISIFPVEXXXXXXXXXXXXXXXXXXXXPTE 334
L L G + + L+ + LY++ N ++ P E P E
Sbjct: 163 LDLGGIGLRNVSTDLFKFSFLTELYINHNNLTRLPPEIGKLKNLVILDASGNSIKTIPPE 222
Query: 335 IGNLKNLVNLNLSYNPLNVLIPEIGDLEKLEAFWCNRIGLKEIPK 469
+G L L + L N ++V+ E+G L +L+ L+++ K
Sbjct: 223 LGLLTELREVLLFDNMISVIPAELGTLFQLKILGIEGNPLQDVYK 267
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 49.6 bits (113), Expect = 5e-07
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Frame = +2
Query: 362 LNLSYNPLNVLIPEIG--DLEKLEAFWCNRIGLKEIPKEIGKLTQLDTFGARGNELKTIP 535
++ S+ PL + P +L + IGLK+ I L ++T N +I
Sbjct: 642 IDFSFCPLTTIDPAFSYSNLVYFDISHAKLIGLKD--SVIETLVNVETVKVNYNHFTSIS 699
Query: 536 EEMTSLAKLRWLTLENNQIETLPDTMDRMTALVHCNLRNNRLEQFPSSILKCKELMFLQL 715
+ ++++ L++L+ N ++ + + ++ LVH +L N ++ FP + + L + L
Sbjct: 700 DAISAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHANNIKIFPEEVWQVSSLKVVNL 759
Query: 716 NSNQISSVPANLDTS-----LVPGL-XMIDLRSNPICELSHPE 826
+SN + + + TS + L M L NP+ LS E
Sbjct: 760 SSNILEKIKLPVATSKKLTRTISQLKIMRTLSGNPVSSLSSQE 802
Score = 42.3 bits (95), Expect = 8e-05
Identities = 21/89 (23%), Positives = 41/89 (46%)
Frame = +2
Query: 335 IGNLKNLVNLNLSYNPLNVLIPEIGDLEKLEAFWCNRIGLKEIPKEIGKLTQLDTFGARG 514
I L N+ + ++YN + I ++ L+ C + + +GKL L
Sbjct: 679 IETLVNVETVKVNYNHFTSISDAISAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHA 738
Query: 515 NELKTIPEEMTSLAKLRWLTLENNQIETL 601
N +K PEE+ ++ L+ + L +N +E +
Sbjct: 739 NNIKIFPEEVWQVSSLKVVNLSSNILEKI 767
Score = 37.9 bits (84), Expect = 0.002
Identities = 45/206 (21%), Positives = 74/206 (35%), Gaps = 11/206 (5%)
Frame = +2
Query: 155 LSLNGFEITEIPGLLYTCLEVEHLYLHKNKISIFPVEXXXXXXXXXXXXXXXXXXXXPTE 334
LS E++ + L + HL LH N I IFP E
Sbjct: 711 LSCTNCEMSYVSPNLGKLKHLVHLDLHANNIKIFPEEVWQVSSLKVVNLSSNILEKIKLP 770
Query: 335 IGNLKNLVNL--------NLSYNPLNVLIPEIGDLEKLEAFWC--NRIGLKEIPKEIGKL 484
+ K L LS NP++ L + + +E + NR+G + +
Sbjct: 771 VATSKKLTRTISQLKIMRTLSGNPVSSLSSQEFVMPTVEELYLVDNRLG-NDCFTALEYF 829
Query: 485 TQLDTFGARGNELKTIPEEM-TSLAKLRWLTLENNQIETLPDTMDRMTALVHCNLRNNRL 661
L N L IP + + + L+ L + N++ L + L NRL
Sbjct: 830 KCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSISSTAQVLLETLYANGNRL 889
Query: 662 EQFPSSILKCKELMFLQLNSNQISSV 739
FP + K L FL +++N + ++
Sbjct: 890 SSFPKNEALSKSLRFLDISTNNLQNL 915
Score = 36.7 bits (81), Expect = 0.004
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 20/186 (10%)
Frame = +2
Query: 326 PTEIGNLKNLVNLNLSYNPLNVLIPEIGDLEKLEAF--WCNRIGLKE--------IPKEI 475
P EIG LKNL ++LSYN + I + + KL + CN + E I
Sbjct: 588 PQEIGLLKNLETIDLSYNAI-TNIASLSECPKLNSINVACNLLSFYEYSNPSATFIDFSF 646
Query: 476 GKLTQLDTFGARGN-------ELKTI---PEEMTSLAKLRWLTLENNQIETLPDTMDRMT 625
LT +D + N K I + +L + + + N ++ D + M
Sbjct: 647 CPLTTIDPAFSYSNLVYFDISHAKLIGLKDSVIETLVNVETVKVNYNHFTSISDAISAMQ 706
Query: 626 ALVHCNLRNNRLEQFPSSILKCKELMFLQLNSNQISSVPANLDTSLVPGLXMIDLRSNPI 805
L + + N + ++ K K L+ L L++N I P + V L +++L SN +
Sbjct: 707 NLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHANNIKIFPE--EVWQVSSLKVVNLSSNIL 764
Query: 806 CELSHP 823
++ P
Sbjct: 765 EKIKLP 770
Score = 36.3 bits (80), Expect = 0.005
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Frame = +2
Query: 353 LVNLNLSYN-PLNVLIPEIGDLEKLEAFWCNRIGLKEIPKEIGKLTQLDTFGARGNELKT 529
L++LN+S+N L++ + + KL+ + K I L QL+ N++
Sbjct: 431 LISLNVSHNLSLDLPLDFMERCVKLKRLDISNNLRSPRGKPITALRQLEVLNMSRNDIYE 490
Query: 530 I-PEEMTSLAK--LRWLTLENNQIETLPDTMDRMTALVHCNLRNNRLEQFPSSILKCKEL 700
+ P + L++ L+ L + NN++ LP + + L + +L N FP I + +L
Sbjct: 491 LDPLIFSGLSRNSLKELNIANNKLFFLPHSTRYLVNLTYLDLSYNNFVTFPLIITELSQL 550
Query: 701 MFLQLNSNQISSVPANL 751
L + N +S + + +
Sbjct: 551 ETLNFSHNLLSQISSKI 567
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 47.6 bits (108), Expect = 2e-06
Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 2/164 (1%)
Frame = +2
Query: 335 IGNLKNLVNLNLSYNPLNVLIPEIGDLEKLE--AFWCNRIGLKEIPKEIGKLTQLDTFGA 508
+ N+KNL L+LS+N + I I L+ LE F NRI E + + +LT L+
Sbjct: 100 LDNVKNLTYLDLSFNNIKT-IRNINHLKGLENLFFVQNRIRRIENLEGLDRLTNLE---L 155
Query: 509 RGNELKTIPEEMTSLAKLRWLTLENNQIETLPDTMDRMTALVHCNLRNNRLEQFPSSILK 688
GN+++ I E + +L L L + N+I T + +++ L ++++NR+ QF +
Sbjct: 156 GGNKIRVI-ENLDTLVNLEKLWVGKNKI-TKFENFEKLQKLSLLSIQSNRITQFENLACL 213
Query: 689 CKELMFLQLNSNQISSVPANLDTSLVPGLXMIDLRSNPICELSH 820
L L ++ N ++S ++ L ++D+ +N I LS+
Sbjct: 214 SHCLRELYVSHNGLTSFSG---IEVLENLEILDVSNNMIKHLSY 254
>SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma
catalytic subunit|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1018
Score = 27.5 bits (58), Expect = 2.5
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 428 AFWCNRIGLKEIPKEIGKLTQLD 496
AF+C R+G+ E+P+ + + +D
Sbjct: 915 AFFCQRLGINELPQSVAFFSSVD 937
>SPAC26H5.07c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 505
Score = 25.8 bits (54), Expect = 7.5
Identities = 7/18 (38%), Positives = 15/18 (83%)
Frame = -1
Query: 723 LLFNWRNISSLHLSIDDG 670
L+FNW++++++ + DDG
Sbjct: 70 LIFNWKDVNAIGMEDDDG 87
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 25.8 bits (54), Expect = 7.5
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 440 NRIGLKEIPKEIGKLTQLDTFGARGNELKTIPE--EMTSLA 556
N I L EIG + L+TF + G + T PE E+ LA
Sbjct: 306 NAIPLSAQNSEIGHVNPLETFTSNGRKRLTSPEIWELQQLA 346
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 477 PISLGISFKPILLHQNASSFSRSPISG 397
P +LGI F P+LL +++ S+S SG
Sbjct: 489 PEALGIIFGPLLLGNSSTDLSKSCPSG 515
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,910,924
Number of Sequences: 5004
Number of extensions: 53014
Number of successful extensions: 147
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 408446760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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