Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_I22
         (831 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    34   0.002
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    28   0.12 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   6.0  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   8.0  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   8.0  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 5/222 (2%)
 Frame = +2

Query: 155  LSLNGFEITEIPGLLYTCLEVEHLYLHKNKISIFPVEXXXXXXXXXXXXXXXXXXXXPTE 334
            L L+G E+T +P  L     ++ L L +N+IS F                        + 
Sbjct: 436  LDLSGNELTSVPDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIGNDIGNLSR 495

Query: 335  --IGNLKNLVNLNLSYNPLNVLIPEIGDLE-KLEAFWCNRIGLKEIPKEIGKLTQLDTFG 505
              + +L NL  LNL+ N +  +     +   +LEA   +   L +I      +  L    
Sbjct: 496  GMLWDLPNLQILNLARNKVQHVERYAFERNMRLEAIRLDGNFLSDINGVFTSIASLLLLN 555

Query: 506  ARGNELKTIPEEMTSLAKLRWLTLENNQIETLPDTMD-RMTALVHCNLRNNRL-EQFPSS 679
               N ++           L+WL +  N IE+L +    R + +   +  +NR+ E  P S
Sbjct: 556  LSENHIEWFDYAFIP-GNLKWLDIHGNFIESLGNYYKIRDSKVKTLDASHNRITELSPLS 614

Query: 680  ILKCKELMFLQLNSNQISSVPANLDTSLVPGLXMIDLRSNPI 805
            +    EL+F  +N+N I+ V  N  T  V  L  +D+ +N I
Sbjct: 615  VPDSVELLF--INNNYINLVRPNTFTDKV-NLTRVDMYANMI 653



 Score = 31.1 bits (67), Expect = 0.013
 Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
 Frame = +2

Query: 344 LKNLVNLNLSYNPLNVLIPEI-GDLEKLEAFWCNRIGLKEI-PKEIGKLTQLDTFGARGN 517
           L NL  L LS N L  +  ++   L  L     +   +  I P      + L      GN
Sbjct: 382 LYNLHTLELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGN 441

Query: 518 ELKTIPEEMTSLAKLRWLTLENNQIETLPD-TMDRMTALVHCNLRNNRLEQFPSSIL-KC 691
           EL ++P+ +  LA L+ L L  N+I    + +   +  L    L  N +      +L   
Sbjct: 442 ELTSVPDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIGNDIGNLSRGMLWDL 501

Query: 692 KELMFLQLNSNQISSV 739
             L  L L  N++  V
Sbjct: 502 PNLQILNLARNKVQHV 517


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 332 EIGNLKNLVNLNLSYNPLNVLIPEIGDLEKLEAFWCNRIG 451
           E+GN   +V +N S NP+ V + ++     L  + CN +G
Sbjct: 501 ELGNDTVIVMMNFSKNPVTVNLTKLHPPADLVVYACNVVG 540


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 466 RYLFQTYSITPERFQLLQ 413
           R+LF+T S TPE  Q L+
Sbjct: 271 RHLFRTASSTPEDLQDLE 288


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 425 PASPDHRFPGSKHL 384
           P  P+H   GSKHL
Sbjct: 96  PYPPNHPLSGSKHL 109


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 425 PASPDHRFPGSKHL 384
           P  P+H   GSKHL
Sbjct: 96  PYPPNHPLSGSKHL 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,275
Number of Sequences: 438
Number of extensions: 3334
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)