Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_I18
         (360 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q96IX5 Cluster: Up-regulated during skeletal muscle gro...    48   7e-05
UniRef50_Q9W2U8 Cluster: CG15304-PA; n=8; Endopterygota|Rep: CG1...    44   6e-04
UniRef50_Q8T8T2 Cluster: AT30562p; n=3; Sophophora|Rep: AT30562p...    38   0.053
UniRef50_Q9VR93 Cluster: Putative 60S ribosomal protein L33; n=2...    34   0.65 
UniRef50_UPI0000F1D27C Cluster: PREDICTED: hypothetical protein;...    33   1.5  
UniRef50_A3SIP4 Cluster: N-acyl-D-amino acid deacylase family pr...    31   6.1  
UniRef50_A0K1Y6 Cluster: Siderophore-interacting protein; n=2; A...    31   6.1  
UniRef50_Q01LW8 Cluster: OSIGBa0101A01.3 protein; n=7; Magnoliop...    31   8.0  

>UniRef50_Q96IX5 Cluster: Up-regulated during skeletal muscle growth
           protein 5; n=9; Euteleostomi|Rep: Up-regulated during
           skeletal muscle growth protein 5 - Homo sapiens (Human)
          Length = 58

 Score = 47.6 bits (108), Expect = 7e-05
 Identities = 22/47 (46%), Positives = 28/47 (59%)
 Frame = +2

Query: 41  MAGDSSVDESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYFTL 181
           MAG  S  + Q  G+ KYFNS T  GR+N   ATY  +  ++LYF L
Sbjct: 1   MAGPESDAQYQFTGIKKYFNSYTLTGRMNCVLATYGSIALIVLYFKL 47


>UniRef50_Q9W2U8 Cluster: CG15304-PA; n=8; Endopterygota|Rep:
           CG15304-PA - Drosophila melanogaster (Fruit fly)
          Length = 48

 Score = 44.4 bits (100), Expect = 6e-04
 Identities = 21/37 (56%), Positives = 25/37 (67%)
 Frame = +2

Query: 71  QLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYFTL 181
           +L GL+K FN  T  GR N A+ATYAVMG +I Y  L
Sbjct: 7   KLTGLSKIFNGTTMSGRANVAKATYAVMGLLIAYQVL 43


>UniRef50_Q8T8T2 Cluster: AT30562p; n=3; Sophophora|Rep: AT30562p -
           Drosophila melanogaster (Fruit fly)
          Length = 336

 Score = 37.9 bits (84), Expect = 0.053
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = +2

Query: 32  QIRMAGDSSVDESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYFTL 181
           QI+++  S V  +   G  KYFN  T  GR N A+ATYA +  + + + L
Sbjct: 24  QIQISRSSPV--AMADGFKKYFNGTTINGRANVAKATYATLALLFIVYKL 71


>UniRef50_Q9VR93 Cluster: Putative 60S ribosomal protein L33; n=2;
           Sophophora|Rep: Putative 60S ribosomal protein L33 -
           Drosophila melanogaster (Fruit fly)
          Length = 63

 Score = 34.3 bits (75), Expect = 0.65
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +2

Query: 95  FNSQTNRGRLNTARATYAVMGAV 163
           FNSQT RGR N A+AT+A +G V
Sbjct: 11  FNSQTMRGRANVAKATWASLGLV 33


>UniRef50_UPI0000F1D27C Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 87

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +2

Query: 38  RMAGDSSVDESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYFTL 181
           ++ G  S    +L G  K+FNS T +GR N   ATY V+      F L
Sbjct: 25  QLFGIDSPTLKELTGWRKHFNSYTLQGRRNFVLATYGVLALTAAAFML 72


>UniRef50_A3SIP4 Cluster: N-acyl-D-amino acid deacylase family
           protein; n=1; Roseovarius nubinhibens ISM|Rep:
           N-acyl-D-amino acid deacylase family protein -
           Roseovarius nubinhibens ISM
          Length = 492

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = +1

Query: 61  R*IPAQRLSKILQQSDKQRKIKYGQSHICS---NGSSHP 168
           R +PA  +  I+ ++D QR + Y Q+ ICS   +G SHP
Sbjct: 332 RLMPATAIFFIMDEADVQRILSYRQTMICSDGISGGSHP 370


>UniRef50_A0K1Y6 Cluster: Siderophore-interacting protein; n=2;
           Arthrobacter|Rep: Siderophore-interacting protein -
           Arthrobacter sp. (strain FB24)
          Length = 346

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 33  KSGWPETLLSMNPSSKA*QNTSTVRQTEED*IRPE 137
           +SGW    L+M+P+++    T TVRQ   D + PE
Sbjct: 77  QSGWYREWLAMDPATRGSMRTYTVRQERLDAVYPE 111


>UniRef50_Q01LW8 Cluster: OSIGBa0101A01.3 protein; n=7;
           Magnoliophyta|Rep: OSIGBa0101A01.3 protein - Oryza
           sativa (Rice)
          Length = 629

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +2

Query: 65  ESQLKGLAKYFNSQTNRGRLNTARA-TYAVMGAVILYF 175
           +  L+G   Y++ Q N  RLN   A T AV+GA IL +
Sbjct: 215 DRSLRGTVVYYDGQMNDSRLNVGLACTAAVVGAAILNY 252


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,174,224
Number of Sequences: 1657284
Number of extensions: 3597033
Number of successful extensions: 8210
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8210
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)