Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_I18
         (360 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   2.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +1

Query: 67  IPAQRLSKILQQSDKQRKIKYGQSHICSNGSSHPLLHTET*IQEMNYKQNLL 222
           +P ++L   L QS +++      S  C NG+   L   +  IQE+  +++LL
Sbjct: 26  LPEEKLLDALCQSFRKQN-----SSSCGNGNRCDLWSEKFPIQELKSQESLL 72


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 214 FACNSFLGFRFQCEVKD 164
           F CNSF  F F     D
Sbjct: 443 FICNSFTKFEFNTVFND 459


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 84   KPLSWDSSTEESP 46
            KP +W SST  SP
Sbjct: 1038 KPSTWWSSTTTSP 1050


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,271
Number of Sequences: 336
Number of extensions: 1003
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)