Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_I18
         (360 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99277-1|CAB16485.1|  491|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z81031-8|CAJ55248.1|  363|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z69903-8|CAD56585.3|  363|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z69903-5|CAH60762.2|  497|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z69903-4|CAA93775.3|  479|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z69903-3|CAI79241.1|  480|Caenorhabditis elegans Hypothetical pr...    26   9.1  
AY836558-1|AAW21316.1|  479|Caenorhabditis elegans casein kinase...    26   9.1  
AY836557-1|AAW21315.1|  297|Caenorhabditis elegans casein kinase...    26   9.1  
AY836556-1|AAW21314.1|  479|Caenorhabditis elegans casein kinase...    26   9.1  

>Z99277-1|CAB16485.1|  491|Caenorhabditis elegans Hypothetical
           protein Y53C12A.2 protein.
          Length = 491

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 91  ILQQSDKQRKIKY-GQSHICSNGSSHPLLHTET*IQEMNYKQNLLACFCKGLL 246
           I++ +  Q +  Y  Q+H  SNG++H +LHT   +  MN    ++ C   GL+
Sbjct: 156 IMRATFSQVQTNYINQTH--SNGATHEVLHTGY-VDGMNVLGIIVFCIVMGLV 205


>Z81031-8|CAJ55248.1|  363|Caenorhabditis elegans Hypothetical
           protein F46F2.2b protein.
          Length = 363

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 62  DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 175
           +   L G A+Y +  T+RG   + R     +G V +YF
Sbjct: 234 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 271


>Z69903-8|CAD56585.3|  363|Caenorhabditis elegans Hypothetical
           protein F46F2.2b protein.
          Length = 363

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 62  DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 175
           +   L G A+Y +  T+RG   + R     +G V +YF
Sbjct: 234 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 271


>Z69903-5|CAH60762.2|  497|Caenorhabditis elegans Hypothetical
           protein F46F2.2c protein.
          Length = 497

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 62  DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 175
           +   L G A+Y +  T+RG   + R     +G V +YF
Sbjct: 350 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 387


>Z69903-4|CAA93775.3|  479|Caenorhabditis elegans Hypothetical
           protein F46F2.2a protein.
          Length = 479

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 62  DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 175
           +   L G A+Y +  T+RG   + R     +G V +YF
Sbjct: 350 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 387


>Z69903-3|CAI79241.1|  480|Caenorhabditis elegans Hypothetical
           protein F46F2.2d protein.
          Length = 480

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 62  DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 175
           +   L G A+Y +  T+RG   + R     +G V +YF
Sbjct: 350 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 387


>AY836558-1|AAW21316.1|  479|Caenorhabditis elegans casein kinase I
           epsilon/delta kin-20C protein.
          Length = 479

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 62  DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 175
           +   L G A+Y +  T+RG   + R     +G V +YF
Sbjct: 350 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 387


>AY836557-1|AAW21315.1|  297|Caenorhabditis elegans casein kinase I
           epsilon/delta kin-20B protein.
          Length = 297

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 62  DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 175
           +   L G A+Y +  T+RG   + R     +G V +YF
Sbjct: 168 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 205


>AY836556-1|AAW21314.1|  479|Caenorhabditis elegans casein kinase I
           epsilon/delta kin-20A protein.
          Length = 479

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 62  DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 175
           +   L G A+Y +  T+RG   + R     +G V +YF
Sbjct: 350 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 387


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,594,096
Number of Sequences: 27780
Number of extensions: 91453
Number of successful extensions: 256
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 256
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)