Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_I09
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    28   0.088
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       24   1.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 27.9 bits (59), Expect = 0.088
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 443 PSRRRPEVPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQT 571
           P +R P V  +S  + T   +P + NGSSP+ L  +  L  ++
Sbjct: 699 PQQRSPSVTDLSTKDGTT--VPESNNGSSPSVLNAIEKLIEKS 739


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 632 TTPREWPPGQQPHDPPR 682
           TT R W   ++P+ PPR
Sbjct: 126 TTERNWEIREKPYTPPR 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.135    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,473
Number of Sequences: 336
Number of extensions: 3404
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)