Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_I09
(723 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 29 0.059
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 2.2
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 2.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.2
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 5.1
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 5.1
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 5.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.9
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 28.7 bits (61), Expect = 0.059
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +1
Query: 391 KVNDDGSFTFGYEAADGSFKEET-------RGTDCVVRGKYGYIDPDGNKREFTYVS 540
+VN DG++ +E ++G +E+ T V +G Y PDG + TYV+
Sbjct: 35 EVNFDGNYINNFETSNGISHQESGQPKQVDNETPVVSQGSDSYTAPDGQQVSITYVA 91
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.4 bits (48), Expect = 2.2
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = +2
Query: 461 EVPTVSYAESTATLIPTATNGSSPTSL-------VTLATLTSQTKRMNPKLQHLTPPSA 616
E+P V+ ST + PT PTSL + L+ L ++N K+ H T S+
Sbjct: 361 EIPNVTLPTSTYSGSPTELPKHLPTSLTKSKMEVMELSDLHHPNCKINRKVHHTTSSSS 419
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.4 bits (48), Expect = 2.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 618 VALGGVKCWSFGFIL 574
+ LGG+ W+FGF +
Sbjct: 72 IVLGGLTYWAFGFAM 86
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.2
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +2
Query: 521 GSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPPGQQP 667
GSSP+S V Q + P L+P S T R WP P
Sbjct: 1482 GSSPSSPVLSVRTQGQAPGIPPAATFLSPNSTTLVLRL--HVWPDNGCP 1528
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.2
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +2
Query: 521 GSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPPGQQP 667
GSSP+S V Q + P L+P S T R WP P
Sbjct: 1478 GSSPSSPVLSVRTQGQAPGIPPAATFLSPNSTTLVLRL--HVWPDNGCP 1524
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2
Query: 533 TSLVTLATLTSQTKRMNPKLQHL 601
TSL+TLAT +Q+++ P + ++
Sbjct: 251 TSLLTLATQNTQSQQSLPPVSYV 273
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.2 bits (45), Expect = 5.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 140 GLVCSRWKTLTTTRTRPRIAELEDRCTSSFRLTNTTPYIDRM 265
GL W T PR EL D ++ +TN+TP + ++
Sbjct: 188 GLTLPSW----TNNIFPR-GELFDATVFTYNITNSTPLLKKL 224
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.2 bits (45), Expect = 5.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 140 GLVCSRWKTLTTTRTRPRIAELEDRCTSSFRLTNTTPYIDRM 265
GL W T PR EL D ++ +TN+TP + ++
Sbjct: 203 GLTLPSW----TNNIFPR-GELFDATVFTYNITNSTPLLKKL 239
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 8.9
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = -2
Query: 239 WSAGTSWYTCPPALLSWAWF 180
W G S C P + + WF
Sbjct: 533 WLCGLSSMLCIPGYMIYIWF 552
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 8.9
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = -2
Query: 239 WSAGTSWYTCPPALLSWAWF 180
W G S C P + + WF
Sbjct: 586 WLCGLSSMLCIPGYMIYIWF 605
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.315 0.135 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,689
Number of Sequences: 438
Number of extensions: 4177
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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