Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_I08
(570 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 279 3e-76
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 278 4e-76
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 278 4e-76
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 158 6e-40
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 155 4e-39
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 96 3e-21
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 50 3e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 44 2e-05
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 40 3e-04
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 38 8e-04
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 35 0.007
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.21
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 30 0.27
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.27
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.36
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 29 0.48
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 29 0.48
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 1.5
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 1.5
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 5.9
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 279 bits (683), Expect = 3e-76
Identities = 136/170 (80%), Positives = 144/170 (84%)
Frame = +2
Query: 59 MGKAXPXXXXXXXXXXXSGKSTTTGHLIYKCGGIDKRTIEXFEKEAQEMGKGSFKYAWVL 238
MGK SGKSTTTGHLIYKCGGIDKRTIE FEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 239 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGT 120
Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPXFEEI 568
GEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ FEEI
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEI 168
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 278 bits (682), Expect = 4e-76
Identities = 135/170 (79%), Positives = 144/170 (84%)
Frame = +2
Query: 59 MGKAXPXXXXXXXXXXXSGKSTTTGHLIYKCGGIDKRTIEXFEKEAQEMGKGSFKYAWVL 238
MGK SGKSTTTGHLIYKCGGIDKRTIE FEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 239 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPXFEEI 568
GEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ FEEI
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEI 168
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 278 bits (682), Expect = 4e-76
Identities = 135/170 (79%), Positives = 144/170 (84%)
Frame = +2
Query: 59 MGKAXPXXXXXXXXXXXSGKSTTTGHLIYKCGGIDKRTIEXFEKEAQEMGKGSFKYAWVL 238
MGK SGKSTTTGHLIYKCGGIDKRTIE FEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 239 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPXFEEI 568
GEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ FEEI
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEI 168
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 158 bits (383), Expect = 6e-40
Identities = 71/152 (46%), Positives = 103/152 (67%)
Frame = +2
Query: 110 SGKSTTTGHLIYKCGGIDKRTIEXFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIAL 289
+GKST G++++ G +DKRT+E E+EA+E GK S+ +W LD ERE+G T+++
Sbjct: 249 AGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGR 308
Query: 290 WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 469
FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQTREHA
Sbjct: 309 AYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHA 368
Query: 470 LLAFTLGVKQLIVGVNKMDSTEPPYSEPXFEE 565
+LA T G+ L+V +NKMD +SE ++E
Sbjct: 369 VLARTQGINHLVVVINKMDEPSVQWSEERYKE 400
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 155 bits (376), Expect = 4e-39
Identities = 75/153 (49%), Positives = 99/153 (64%)
Frame = +2
Query: 110 SGKSTTTGHLIYKCGGIDKRTIEXFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIAL 289
SGKST G ++++ G I+ R+++ EA GKGSF YAW+LD + ER RG+T+D+A
Sbjct: 188 SGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVAS 247
Query: 290 WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 469
FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +NGQTREHA
Sbjct: 248 TTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHA 307
Query: 470 LLAFTLGVKQLIVGVNKMDSTEPPYSEPXFEEI 568
L LG+ +++V VNK+D +SE F+EI
Sbjct: 308 YLLRALGISEIVVSVNKLDLMS--WSEDRFQEI 338
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 96.3 bits (229), Expect = 3e-21
Identities = 50/117 (42%), Positives = 72/117 (61%)
Frame = +2
Query: 200 EMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 379
++G+ SF +DK E+ RGITI A ++ET+ + +D PGH D+IKNMITG +
Sbjct: 79 DLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAA 138
Query: 380 QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 550
D A+++V+A G+ QTREH LLA +GVKQ++V +NK+D EP E
Sbjct: 139 TMDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIE 188
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 49.6 bits (113), Expect = 3e-07
Identities = 36/98 (36%), Positives = 50/98 (51%)
Frame = +2
Query: 233 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 412
V+D L AER+RGITI+ A F + +ID PGH DF + + D AV I+
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-- 124
Query: 413 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 526
+ AG+ QT+ A G+ ++I VNKMD
Sbjct: 125 ---DGSAGV--EAQTKVVWKQATKRGIPKVIF-VNKMD 156
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 44.0 bits (99), Expect = 2e-05
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 236 LDKLKAERERGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 403
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 404 VAAGTG 421
V A G
Sbjct: 155 VDASQG 160
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 39.5 bits (88), Expect = 3e-04
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +2
Query: 314 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 493
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 494 KQLIVGVNKMDSTEPPYSEPXFEEI 568
K +I+ NK+D +E ++ I
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSI 187
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 38.3 bits (85), Expect = 8e-04
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 19/138 (13%)
Frame = +2
Query: 110 SGKSTTTGHLIYKCGGIDKRTIEXFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIAL 289
SGK+T T ++Y G I K+ E+ +G +D ++ ERE+GITI A
Sbjct: 70 SGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELEREKGITIQSAA 119
Query: 290 ----WK---------------FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 412
W+ FE S Y + IID PGH DF + D AVL++ A
Sbjct: 120 THCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCA 178
Query: 413 GTGEFEAGISKNGQTREH 466
+G I+ + Q R +
Sbjct: 179 VSGVQSQTITVDRQMRRY 196
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 35.1 bits (77), Expect = 0.007
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 206 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 379
GK + A+ + + GIT I + F+ ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 380 QADCAVLIVAAGTG 421
AD VL+VA G
Sbjct: 243 IADIVVLVVAGDDG 256
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.21
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 311 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.9 bits (64), Expect = 0.27
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 276 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNXSMVRLSIPPH 148
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.27
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 239 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 361
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.36
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 323 IIDAPGHRDFIKNMITGTSQADCAVLIV 406
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 29.1 bits (62), Expect = 0.48
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = +2
Query: 113 GKSTTTGHLIYKCGGIDKRTI---EXFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 283
GKST T L+ K G I + A E +G + + L AE D+
Sbjct: 31 GKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAIS-LFAEMTDDDMKDM 89
Query: 284 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 406
+ + + V +ID+PGH DF + D A+++V
Sbjct: 90 KE-PADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 29.1 bits (62), Expect = 0.48
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = +2
Query: 113 GKSTTTGHLIYKCGGIDKRTI---EXFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 283
GKST T L+ K G I + A E +G + + L AE D+
Sbjct: 31 GKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAIS-LFAEMTDDDMKDM 89
Query: 284 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 406
+ + + V +ID+PGH DF + D A+++V
Sbjct: 90 KE-PADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.5 bits (58), Expect = 1.5
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 254 ERERGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 406
ERER ++I +A+ + + ID PGH DF+ + + +D VL+V
Sbjct: 185 ERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 300 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNXSMV 169
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.4 bits (53), Expect = 5.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 200 PGPPSRTXRWYVCQYHHIC 144
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,101,890
Number of Sequences: 5004
Number of extensions: 38730
Number of successful extensions: 117
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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