Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_I04
         (564 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   1.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   3.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   3.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.6  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 136 APLLAPSDEPSWTGPPS 86
           +PLL P   P+++ PPS
Sbjct: 16  SPLLTPPHNPAYSPPPS 32


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 139 PAPLLAPSDEPSWTGPPS 86
           P P ++ +  P W  PPS
Sbjct: 400 PEPTISTTPRPEWARPPS 417


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 74  GNENNTPSTT 45
           GN NNTPS T
Sbjct: 126 GNNNNTPSAT 135


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +1

Query: 73  PSYLYSAVPSRKARRKEREGEPAGDPKLYLQEALLERK 186
           PSY      + +A ++ R+   A + ++ ++ A LER+
Sbjct: 136 PSYWEKRRKNNEAAKRSRDARRAKEDEIAIRCAFLERE 173


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 74  GNENNTPSTT 45
           GN NNTPS T
Sbjct: 74  GNNNNTPSAT 83


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 74  GNENNTPSTT 45
           GN NNTPS T
Sbjct: 257 GNNNNTPSAT 266


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 506 NCAGNSFAYLVGKTV 462
           NC G  FA L  KTV
Sbjct: 434 NCIGQKFAMLEIKTV 448


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 506 NCAGNSFAYLVGKTV 462
           NC G  FA L  KTV
Sbjct: 434 NCIGQKFAMLEIKTV 448


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,785
Number of Sequences: 336
Number of extensions: 1289
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)