Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_I04
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical pr... 102 2e-22
Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical pr... 102 2e-22
Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical pr... 102 2e-22
Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical pr... 102 2e-22
Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical pr... 102 2e-22
Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical pr... 102 2e-22
AF125960-4|AAD14738.1| 292|Caenorhabditis elegans Hypothetical ... 95 2e-20
Z77660-8|CAB01178.2| 193|Caenorhabditis elegans Hypothetical pr... 89 2e-18
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 27 9.3
>Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 102 bits (245), Expect = 2e-22
Identities = 46/119 (38%), Positives = 64/119 (53%)
Frame = +1
Query: 208 QLVDLPHGLDYNEWLXSHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 387
++ LP G++ EW+ + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 130 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 189
Query: 388 KKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYANEFPAQFEGXXXXXXXXXXXXXAHMY 564
K+ A QY+D V+T + E +FPTKY N+F FE HMY
Sbjct: 190 KRQVYPAVQYIDCVITQCESMSRQEEIFPTKYGNKFNGNFEPAVKKMLSHLFHCMGHMY 248
>Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 102 bits (245), Expect = 2e-22
Identities = 46/119 (38%), Positives = 64/119 (53%)
Frame = +1
Query: 208 QLVDLPHGLDYNEWLXSHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 387
++ LP G++ EW+ + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 130 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 189
Query: 388 KKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYANEFPAQFEGXXXXXXXXXXXXXAHMY 564
K+ A QY+D V+T + E +FPTKY N+F FE HMY
Sbjct: 190 KRQVYPAVQYIDCVITQCESMSRQEEIFPTKYGNKFNGNFEPAVKKMLSHLFHCMGHMY 248
>Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical
protein F09A5.4e protein.
Length = 324
Score = 102 bits (245), Expect = 2e-22
Identities = 46/119 (38%), Positives = 64/119 (53%)
Frame = +1
Query: 208 QLVDLPHGLDYNEWLXSHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 387
++ LP G++ EW+ + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 104 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 163
Query: 388 KKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYANEFPAQFEGXXXXXXXXXXXXXAHMY 564
K+ A QY+D V+T + E +FPTKY N+F FE HMY
Sbjct: 164 KRQVYPAVQYIDCVITQCESMSRQEEIFPTKYGNKFNGNFEPAVKKMLSHLFHCMGHMY 222
>Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical
protein F09A5.4d protein.
Length = 314
Score = 102 bits (245), Expect = 2e-22
Identities = 46/119 (38%), Positives = 64/119 (53%)
Frame = +1
Query: 208 QLVDLPHGLDYNEWLXSHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 387
++ LP G++ EW+ + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 94 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 153
Query: 388 KKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYANEFPAQFEGXXXXXXXXXXXXXAHMY 564
K+ A QY+D V+T + E +FPTKY N+F FE HMY
Sbjct: 154 KRQVYPAVQYIDCVITQCESMSRQEEIFPTKYGNKFNGNFEPAVKKMLSHLFHCMGHMY 212
>Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical
protein F09A5.4b protein.
Length = 341
Score = 102 bits (245), Expect = 2e-22
Identities = 46/119 (38%), Positives = 64/119 (53%)
Frame = +1
Query: 208 QLVDLPHGLDYNEWLXSHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 387
++ LP G++ EW+ + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 121 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 180
Query: 388 KKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYANEFPAQFEGXXXXXXXXXXXXXAHMY 564
K+ A QY+D V+T + E +FPTKY N+F FE HMY
Sbjct: 181 KRQVYPAVQYIDCVITQCESMSRQEEIFPTKYGNKFNGNFEPAVKKMLSHLFHCMGHMY 239
>Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical
protein F09A5.4a protein.
Length = 300
Score = 102 bits (245), Expect = 2e-22
Identities = 46/119 (38%), Positives = 64/119 (53%)
Frame = +1
Query: 208 QLVDLPHGLDYNEWLXSHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 387
++ LP G++ EW+ + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 80 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 139
Query: 388 KKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYANEFPAQFEGXXXXXXXXXXXXXAHMY 564
K+ A QY+D V+T + E +FPTKY N+F FE HMY
Sbjct: 140 KRQVYPAVQYIDCVITQCESMSRQEEIFPTKYGNKFNGNFEPAVKKMLSHLFHCMGHMY 198
>AF125960-4|AAD14738.1| 292|Caenorhabditis elegans Hypothetical
protein T12B3.4 protein.
Length = 292
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Frame = +1
Query: 196 LDMRQLVDLPHGLDYNEWLXSHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWY 375
+D+R V LP ++++WL HT+ F+ +NL+YGT+S+ CT +CP M G Y W
Sbjct: 102 VDLRHAVKLPPSENFDDWLAVHTVDFFNRINLMYGTISDVCTRESCPTMCGGSRYEYLWQ 161
Query: 376 D--ERGKKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYANEFPAQFEGXXXXXXXXXXXX 549
D E K +R+ APQY+ +M + + +NDE +FP+ FP F
Sbjct: 162 DGIEYKKPTRLPAPQYMQLLMDWIEVRINDEHIFPSSTNVSFPKDFRQICKKILTRLFRV 221
Query: 550 XAHMY 564
H+Y
Sbjct: 222 FVHVY 226
>Z77660-8|CAB01178.2| 193|Caenorhabditis elegans Hypothetical
protein F38H4.10 protein.
Length = 193
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/123 (37%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +1
Query: 199 DMRQLVDLPHGLDYNEWLXSHTLALFDHVNLVYGTVSEF-CTAATCPDMTGPGGRSYAWY 375
++R + LP G D NEWL + + L + V +V+G + E CT + CP MT G R Y W
Sbjct: 21 NLRDALKLPPGEDKNEWLAVNIIDLVNQVRMVFGVLCESECTDSKCPSMTAHG-RQYTWT 79
Query: 376 DERGKKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYANEFPAQFEGXXXXXXXXXXXXXA 555
E G +APQY+D +T Q V+DE VFP++ +FP FE A
Sbjct: 80 SE-GTLLNTSAPQYIDLSLTACQNNVDDENVFPSEIGKQFPTDFEERCQAIMRRLFRIYA 138
Query: 556 HMY 564
H+Y
Sbjct: 139 HVY 141
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/19 (68%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = -3
Query: 139 PAP-LLAPSDEPSWTGPPS 86
P+P +APSDEPS +GPPS
Sbjct: 88 PSPGTVAPSDEPSPSGPPS 106
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical protein
C09H6.1b protein.
Length = 1309
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 85 YSAVPSRKARRKEREGEPAGDPKLYLQEALLERKLPELDMRQLVD 219
Y P +K RK+ EPA DP+L+ + R+L E R ++
Sbjct: 917 YKQRPEKK--RKQSSEEPASDPELFGSSSQPTRQLSERATRNRIN 959
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical protein
C09H6.1a protein.
Length = 1311
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 85 YSAVPSRKARRKEREGEPAGDPKLYLQEALLERKLPELDMRQLVD 219
Y P +K RK+ EPA DP+L+ + R+L E R ++
Sbjct: 917 YKQRPEKK--RKQSSEEPASDPELFGSSSQPTRQLSERATRNRIN 959
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,334,763
Number of Sequences: 27780
Number of extensions: 127185
Number of successful extensions: 376
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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