Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_I04
         (564 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.70 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   3.7  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       22   4.9  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    21   6.5  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 280 HVNLVYGTVSEFCTAATCPDMTGPGG 357
           +VN +Y + ++F T  T     GPGG
Sbjct: 379 YVNSMYASGAQFATPCTPSPPRGPGG 404


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 73  PSYLYSAVPSRKARRKEREGEPAGDPKLYLQE 168
           P Y+    P     R+E E EP  +  +Y+ +
Sbjct: 103 PVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQ 134



 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 73  PSYLYSAVPSRKARRKEREGEPAGDPKLYLQE 168
           P Y+    P     R+E E EP  +  +Y+ +
Sbjct: 129 PVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQ 160


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 76  SYLYSAVPSRKARRKEREGEPAGDPK 153
           SY+Y+A     A   E E +   DP+
Sbjct: 17  SYIYAAPEPEPAPEPEAEADAEADPE 42


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 97  PSRKARRKEREGEPAGDPKLYLQE 168
           P+R  R  E E EP  +  +Y+ +
Sbjct: 29  PTRLRREAEPEAEPGNNRPVYIPQ 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,810
Number of Sequences: 438
Number of extensions: 1648
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)