Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_I03
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   2.6  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.5  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   6.1  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   6.1  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   6.1  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   6.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.0  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   8.0  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 20  KEEKLRSEWS*RIVNENNFVMY*IKN*NENN 112
           +E K+ S  S R ++ NN   Y   N N NN
Sbjct: 77  REPKIISSLSNRTIHNNNNYKYNYNNNNYNN 107


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +3

Query: 186 HKWSSENIENTDVVLLADSETSYYKSHKDVYPVLKTE 296
           H  S  NI  +DV+ + +++T Y      +   + TE
Sbjct: 5   HDMSDGNIHMSDVIEVIETDTKYNGREDQIPREMNTE 41


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +3

Query: 186 HKWSSENIENTDVVLLADSETSYYKSHKDVYPVLKTE 296
           H  S  NI  +DV+ + +++T Y      +   + TE
Sbjct: 5   HDMSDGNIHMSDVIEVIETDTKYNGREDQIPREMNTE 41


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 20  KEEKLRSEWS*RIVNENNFVMY*IKN*NENN 112
           +E K+ S  S + ++ NN   Y   N N NN
Sbjct: 77  REPKIISSLSNKTIHNNNNYKYNYNNNNYNN 107


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 20  KEEKLRSEWS*RIVNENNFVMY*IKN*NENN 112
           +E K+ S  S + ++ NN   Y   N N NN
Sbjct: 77  REPKIISSLSNKTIHNNNNYKYNYNNNNYNN 107


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 20  KEEKLRSEWS*RIVNENNFVMY*IKN*NENN 112
           +E K+ S  S + ++ NN   Y   N N NN
Sbjct: 77  REPKIISSLSNKTIHNNNNYKYNYNNNNYNN 107


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 20  KEEKLRSEWS*RIVNENNFVMY*IKN*NENN 112
           +E K+ S  S + ++ NN   Y   N N NN
Sbjct: 310 REPKIISSLSNKTIHNNNNYKYNYNNNNYNN 340


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 218 SIFYVFTGPFVQSIYEK 168
           S++YV   PF++S YE+
Sbjct: 275 SLYYVNMEPFMKSQYEE 291


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 218 SIFYVFTGPFVQSIY 174
           S++YV T PF++S Y
Sbjct: 275 SLYYVNTKPFMKSEY 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,872
Number of Sequences: 438
Number of extensions: 3539
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)