BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_I01
(776 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ420785-4|CAD12784.1| 395|Anopheles gambiae serpin protein. 25 3.5
AJ420785-3|CAD12783.1| 380|Anopheles gambiae serpin protein. 25 3.5
AJ420785-2|CAD12782.1| 382|Anopheles gambiae serpin protein. 25 3.5
AJ420785-1|CAD12781.1| 379|Anopheles gambiae serpin protein. 25 3.5
AJ271353-1|CAB69785.1| 380|Anopheles gambiae putative serine pr... 25 3.5
AJ271352-1|CAB69784.1| 379|Anopheles gambiae putative serine pr... 25 3.5
AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant r... 24 4.6
>AJ420785-4|CAD12784.1| 395|Anopheles gambiae serpin protein.
Length = 395
Score = 24.6 bits (51), Expect = 3.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 260 VPVTDLKKHVLFDSIIEAGF 201
VP+ ++KKH F++ E GF
Sbjct: 202 VPMMNIKKHFAFNNFEELGF 221
>AJ420785-3|CAD12783.1| 380|Anopheles gambiae serpin protein.
Length = 380
Score = 24.6 bits (51), Expect = 3.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 260 VPVTDLKKHVLFDSIIEAGF 201
VP+ ++KKH F++ E GF
Sbjct: 202 VPMMNIKKHFAFNNFEELGF 221
>AJ420785-2|CAD12782.1| 382|Anopheles gambiae serpin protein.
Length = 382
Score = 24.6 bits (51), Expect = 3.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 260 VPVTDLKKHVLFDSIIEAGF 201
VP+ ++KKH F++ E GF
Sbjct: 202 VPMMNIKKHFAFNNFEELGF 221
>AJ420785-1|CAD12781.1| 379|Anopheles gambiae serpin protein.
Length = 379
Score = 24.6 bits (51), Expect = 3.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 260 VPVTDLKKHVLFDSIIEAGF 201
VP+ ++KKH F++ E GF
Sbjct: 202 VPMMNIKKHFAFNNFEELGF 221
>AJ271353-1|CAB69785.1| 380|Anopheles gambiae putative serine
protease inhibitor protein.
Length = 380
Score = 24.6 bits (51), Expect = 3.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 260 VPVTDLKKHVLFDSIIEAGF 201
VP+ ++KKH F++ E GF
Sbjct: 202 VPMMNIKKHFAFNNFEELGF 221
>AJ271352-1|CAB69784.1| 379|Anopheles gambiae putative serine
protease inhibitor protein.
Length = 379
Score = 24.6 bits (51), Expect = 3.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 260 VPVTDLKKHVLFDSIIEAGF 201
VP+ ++KKH F++ E GF
Sbjct: 202 VPMMNIKKHFAFNNFEELGF 221
>AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant
receptor Or4 protein.
Length = 397
Score = 24.2 bits (50), Expect = 4.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 273 YWIAEITMVCGHVLR 317
YWIA I +C H R
Sbjct: 142 YWIAPIPSICAHYYR 156
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 847,738
Number of Sequences: 2352
Number of extensions: 19444
Number of successful extensions: 41
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -