Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_H23
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125965-1|AAL38962.1| 339|Caenorhabditis elegans Hypothetical ... 98 7e-21
AF125462-6|AAD12857.2| 239|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z71259-6|CAA95792.1| 328|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AL033514-10|CAE47472.1| 436|Caenorhabditis elegans Hypothetical... 37 0.013
AL033514-9|CAA22098.1| 605|Caenorhabditis elegans Hypothetical ... 37 0.013
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 2.7
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 2.7
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 2.7
AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical ... 29 3.5
AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical... 29 3.5
AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein... 29 3.5
Z74038-5|CAA98494.1| 137|Caenorhabditis elegans Hypothetical pr... 29 4.7
AC024776-2|AAK68467.1| 400|Caenorhabditis elegans Hypothetical ... 28 6.2
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 28 8.2
>AF125965-1|AAL38962.1| 339|Caenorhabditis elegans Hypothetical
protein H43I07.3 protein.
Length = 339
Score = 97.9 bits (233), Expect = 7e-21
Identities = 49/120 (40%), Positives = 72/120 (60%)
Frame = +1
Query: 361 PAYNEEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDK 540
PA NE +R+ MLD+ ++LE R +++ + YEII+V DGS D T + +
Sbjct: 88 PAMNEVERIEIMLDDCCDYLEARAEKDKDFTYEIIVVDDGSTDETADIVVQIGAR--RQN 145
Query: 541 VKCLELIKNRGKGGAVRLGIQSSRGATILFADADGASKFEDLTKLEVALKDIVKCDPLKD 720
++ L++ NRGKGGAV++G+ S G ILFADADGA+KF D LE + +PL +
Sbjct: 146 LRVLKMKANRGKGGAVKMGVLHSSGKLILFADADGATKFADFENLEKEMLRTAGGEPLDE 205
>AF125462-6|AAD12857.2| 239|Caenorhabditis elegans Hypothetical
protein Y66H1A.2 protein.
Length = 239
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/94 (36%), Positives = 47/94 (50%)
Frame = +1
Query: 361 PAYNEEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDK 540
P YNE++ LP I +EN KE +E+IIV D S D T +A+ +YG DK
Sbjct: 12 PTYNEKENLPIC----IWLIENYLKE---VSHEVIIVDDASPDGTQGIAKLLQKEYGDDK 64
Query: 541 VKCLELIKNRGKGGAVRLGIQSSRGATILFADAD 642
+ + G G A G+ +RG I+ DAD
Sbjct: 65 ILIKPRVGKLGLGTAYSHGLSFARGEFIILMDAD 98
>Z71259-6|CAA95792.1| 328|Caenorhabditis elegans Hypothetical
protein F13G3.6 protein.
Length = 328
Score = 42.3 bits (95), Expect = 4e-04
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = +1
Query: 361 PAYNEEKRLPPMLDETIE-FLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSD 537
PA N EK L ET+ L+ EN K EI + DGS D TV++ E+ +++
Sbjct: 13 PAKNVEK----FLRETLNGLLDQTACENS--KIEICLADDGSVDDTVRILENARLEFEEM 66
Query: 538 --KVKCLELIKNRGKGGAVRLGIQSSRGATILFADADGASKFEDL-TKLEVALK 690
V + + G G A ++SS+G + F DAD S + ++LE+A K
Sbjct: 67 GMNVVVTHVPQPGGVGAAKDCAVRSSKGRYLCFNDADDVSSPNRIKSQLELATK 120
>AL033514-10|CAE47472.1| 436|Caenorhabditis elegans Hypothetical
protein Y75B8A.9b protein.
Length = 436
Score = 37.1 bits (82), Expect = 0.013
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +1
Query: 388 PPMLDETIEFLENRQKENPSYKYEIIIVSDGSK-----DSTVKVAESYSIKYGSDKVKCL 552
P +L + + +R K P + +EI++V D S+ D +K E + I++ +KVK L
Sbjct: 172 PSVLIRMVNSIFDRTK--PEHLHEILLVDDSSEWSNATDEAIKYREKHIIQW--EKVKFL 227
Query: 553 ELIKNRGKGGAVRLGIQSSRGATILFADA 639
+ KN G A G + + G ++F D+
Sbjct: 228 KTDKNEGLIRAKIFGARRANGEVLVFLDS 256
>AL033514-9|CAA22098.1| 605|Caenorhabditis elegans Hypothetical
protein Y75B8A.9a protein.
Length = 605
Score = 37.1 bits (82), Expect = 0.013
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +1
Query: 388 PPMLDETIEFLENRQKENPSYKYEIIIVSDGSK-----DSTVKVAESYSIKYGSDKVKCL 552
P +L + + +R K P + +EI++V D S+ D +K E + I++ +KVK L
Sbjct: 172 PSVLIRMVNSIFDRTK--PEHLHEILLVDDSSEWSNATDEAIKYREKHIIQW--EKVKFL 227
Query: 553 ELIKNRGKGGAVRLGIQSSRGATILFADA 639
+ KN G A G + + G ++F D+
Sbjct: 228 KTDKNEGLIRAKIFGARRANGEVLVFLDS 256
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 368 IMKKKDCHPCWMKQLSSWRTDKKKTLHTNM 457
I+KKK+ M+ +++W +K K +H NM
Sbjct: 4 IVKKKEAMKKQMEDMAAWELEKIKRIHANM 33
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 368 IMKKKDCHPCWMKQLSSWRTDKKKTLHTNM 457
I+KKK+ M+ +++W +K K +H NM
Sbjct: 27 IVKKKEAMKKQMEDMAAWELEKIKRIHANM 56
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 368 IMKKKDCHPCWMKQLSSWRTDKKKTLHTNM 457
I+KKK+ M+ +++W +K K +H NM
Sbjct: 277 IVKKKEAMKKQMEDMAAWELEKIKRIHANM 306
>AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 373 EEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKV 504
+++RLPP+LDE + + N + YE+I ++ +KV
Sbjct: 470 DQQRLPPLLDEKFQLVRLIGDGNTAVVYEVIDKTNNDDRKAMKV 513
>AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 373 EEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKV 504
+++RLPP+LDE + + N + YE+I ++ +KV
Sbjct: 470 DQQRLPPLLDEKFQLVRLIGDGNTAVVYEVIDKTNNDDRKAMKV 513
>AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein
protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 373 EEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKV 504
+++RLPP+LDE + + N + YE+I ++ +KV
Sbjct: 470 DQQRLPPLLDEKFQLVRLIGDGNTAVVYEVIDKTNNDDRKAMKV 513
>Z74038-5|CAA98494.1| 137|Caenorhabditis elegans Hypothetical
protein F58B4.4 protein.
Length = 137
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 388 PPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKN 567
PP+++ T+E + NR + + IV D D + K +I+Y SD +K +I +
Sbjct: 35 PPIVNITVELVSNRSFDPEKNASNLKIVKDAVDDYSKK----ENIRYPSDNIK-QSIIDH 89
Query: 568 RGK 576
GK
Sbjct: 90 GGK 92
>AC024776-2|AAK68467.1| 400|Caenorhabditis elegans Hypothetical
protein Y41D4B.17 protein.
Length = 400
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -2
Query: 698 TISFRATSNFVKSSNFEAPSASANNIVAPLELCMPSLTAPPFPLFFINSRH 546
+I+F+ ++ ++ SN+E +A+ + E+ PSL F NS H
Sbjct: 221 SIAFKVSNQWIDPSNYETTAATTTGFLMSQEVSTPSLKVD----FMFNSGH 267
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 462 NHSE*RK*RQHS*SSRELLHKIW**QSEMPRVNKEQRKRRSSQT 593
+HS+ RK R SRE H+ + E R K++R+RRSS T
Sbjct: 428 HHSKSRKHRSKRSESREERHRR---RKEKKREKKKKRRRRSSTT 468
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,145,969
Number of Sequences: 27780
Number of extensions: 294662
Number of successful extensions: 811
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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