Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_H18
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032655-9|CAA21725.3| 339|Caenorhabditis elegans Hypothetical ... 162 2e-40
AL032655-8|CAH60799.1| 348|Caenorhabditis elegans Hypothetical ... 162 2e-40
U42833-4|AAA83579.1| 319|Caenorhabditis elegans Hypothetical pr... 96 2e-20
U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical pr... 33 0.20
U70857-12|AAB09168.1| 337|Caenorhabditis elegans Serpentine rec... 32 0.46
AF098993-2|AAC67466.1| 549|Caenorhabditis elegans Hypothetical ... 29 2.4
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ... 28 5.7
L10986-11|AAK93846.2| 203|Caenorhabditis elegans Hypothetical p... 27 9.9
>AL032655-9|CAA21725.3| 339|Caenorhabditis elegans Hypothetical
protein Y6B3B.5a protein.
Length = 339
Score = 162 bits (394), Expect = 2e-40
Identities = 81/187 (43%), Positives = 115/187 (61%), Gaps = 2/187 (1%)
Frame = +2
Query: 11 DVVVWIDPLDATQEYTEKLYQYVTTMVCVAIRGVPIIGVIHYPFTQQTYWAW--YTKKTS 184
DV V++DPLDATQE+TE L +YVT M C+ + PI G I+ PF +T + + TS
Sbjct: 151 DVRVFVDPLDATQEFTEGLTEYVTVMACIVLDAEPIFGAIYRPFFNETIFGLQGFGVITS 210
Query: 185 ANMPLVPHKEENREHPRVVISRSHPGKVATVAKSAFGDKSNVSKAAGAGFKVMEVVNGTY 364
+ L P E+++ +VV+SRSH GKV + + +GDK N+ A G+G+K + +VNGT
Sbjct: 211 DGVRLNPI-EDSKTAKKVVVSRSHAGKVKEIVEKVYGDKMNIEPAGGSGYKTLRLVNGTA 269
Query: 365 DLYLHVTTIKKWDICAGDAILKAVDGKMTTMKGDNIDYSADGHVAVTDGILVTRYDHDYY 544
+LYLH T IKKWD CAGDAIL+ + G M ++G + YS+ + G+L T + Y
Sbjct: 270 ELYLHTTAIKKWDTCAGDAILRTMGGAMLDLEGQPLRYSSADPLLNKKGLLATVRNPYSY 329
Query: 545 LKKMPSI 565
L K I
Sbjct: 330 LNKFQGI 336
>AL032655-8|CAH60799.1| 348|Caenorhabditis elegans Hypothetical
protein Y6B3B.5b protein.
Length = 348
Score = 162 bits (394), Expect = 2e-40
Identities = 81/187 (43%), Positives = 115/187 (61%), Gaps = 2/187 (1%)
Frame = +2
Query: 11 DVVVWIDPLDATQEYTEKLYQYVTTMVCVAIRGVPIIGVIHYPFTQQTYWAW--YTKKTS 184
DV V++DPLDATQE+TE L +YVT M C+ + PI G I+ PF +T + + TS
Sbjct: 160 DVRVFVDPLDATQEFTEGLTEYVTVMACIVLDAEPIFGAIYRPFFNETIFGLQGFGVITS 219
Query: 185 ANMPLVPHKEENREHPRVVISRSHPGKVATVAKSAFGDKSNVSKAAGAGFKVMEVVNGTY 364
+ L P E+++ +VV+SRSH GKV + + +GDK N+ A G+G+K + +VNGT
Sbjct: 220 DGVRLNPI-EDSKTAKKVVVSRSHAGKVKEIVEKVYGDKMNIEPAGGSGYKTLRLVNGTA 278
Query: 365 DLYLHVTTIKKWDICAGDAILKAVDGKMTTMKGDNIDYSADGHVAVTDGILVTRYDHDYY 544
+LYLH T IKKWD CAGDAIL+ + G M ++G + YS+ + G+L T + Y
Sbjct: 279 ELYLHTTAIKKWDTCAGDAILRTMGGAMLDLEGQPLRYSSADPLLNKKGLLATVRNPYSY 338
Query: 545 LKKMPSI 565
L K I
Sbjct: 339 LNKFQGI 345
>U42833-4|AAA83579.1| 319|Caenorhabditis elegans Hypothetical
protein ZK430.2 protein.
Length = 319
Score = 96.3 bits (229), Expect = 2e-20
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Frame = +2
Query: 11 DVVVWIDPLDATQEYT-------EKLYQYVTTMVCVAIRGVPIIGVIHYPFTQQ---TYW 160
DVVVW+DPLD T E L + VT ++ +A +G P+ G+IH P+ ++ T W
Sbjct: 113 DVVVWVDPLDGTSEVALAVKNKNMALLEQVTVLIGIAYKGRPVAGIIHQPYHEKLGRTVW 172
Query: 161 AWYTKKTSANMPLVPHKEENREHPRVVISRSHPGKVATVAKSAFGDKS---NVSKAAGAG 331
A +P + ++ VV +RSH + + A A ++ +V K GAG
Sbjct: 173 AIQGCGVHGVVPATGNAQKI-----VVTTRSHLSESVSNALEALKTRNLADSVEKVGGAG 227
Query: 332 FKVMEVVNGTYDLYLHVTTIKKWDICAGDAILKAVDGKMTTMKGDNIDYSADGHVAVTDG 511
FKV++V+ G KKWD CA +A+L A G +T + G +I Y + T G
Sbjct: 228 FKVLKVLEGCAAYVFASAGCKKWDTCAVEAVLTAAGGTLTDISGRDIRYEPGVQLNNTGG 287
Query: 512 ILVTR--YDHDYYLKKMPSIIHSM 577
+L T H Y+ +P I +M
Sbjct: 288 VLATASWVKHKDYIDTIPQEIKNM 311
>U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical
protein C46A5.1 protein.
Length = 497
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 293 GDKSNVSKAAGAGFKVMEVVNGTYDLYLHVTTIKKW 400
G+ V G KV+ V NGTY ++HV K W
Sbjct: 342 GEFKQVELGKGWNLKVLSVSNGTYKTFIHVHHYKNW 377
>U70857-12|AAB09168.1| 337|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 26 protein.
Length = 337
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +2
Query: 44 TQEYTEKLYQYVTTMVCVAIRGVPIIGVIHYPFTQQTYWAWYTKKTSANMPLVP 205
T YT +Y + M+ V I+YPF + WA Y KK ++P
Sbjct: 112 TPFYTSYMYAQLAKMLSTLAMSVNRYTSINYPFKHKQIWAMYCKKVIIATFIIP 165
>AF098993-2|AAC67466.1| 549|Caenorhabditis elegans Hypothetical
protein T10B11.2 protein.
Length = 549
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 166 PCPICLLCEWIMDDSYYWHSSYSNTYHCCNI 74
PCP+C+ + Y+WH+ +++ CC I
Sbjct: 389 PCPVCMKPQGNDKYDYHWHAEFTHVI-CCVI 418
>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
protein Y71A12B.4 protein.
Length = 1913
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -2
Query: 581 NAWSELLKAFSSSNNHDHTL*LKYHQSLQHGHLLNNQCYHLSLWSFCHQRLLEWHLQHK 405
N WS LL+A + ++ + LK+H + + HL+ ++ H L+ LQHK
Sbjct: 839 NGWSPLLEACARGHSGVANILLKHHARIDVFDEMGRTALHLAAFN-GHLSLVHLLLQHK 896
>L10986-11|AAK93846.2| 203|Caenorhabditis elegans Hypothetical
protein F10E9.10 protein.
Length = 203
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 193 HIS*CFLSIPCPICLLCE--WIMDDSYYWHSSYSNTYHCCNILVQFLCILLGGI 38
H+ F I PI ++ W++ YY SS T++ + LC LLGGI
Sbjct: 59 HLLQYFPVIAAPIIMVISFSWLIIAIYYSSSSCVLTFNFMEMPSAVLCSLLGGI 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,871,450
Number of Sequences: 27780
Number of extensions: 383415
Number of successful extensions: 1148
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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