Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_H14
(479 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107575-1|AAI07576.1| 72|Homo sapiens transmembrane protein 1... 122 7e-28
BC028585-1|AAH28585.1| 72|Homo sapiens transmembrane protein 1... 122 7e-28
BC026285-1|AAH26285.1| 72|Homo sapiens transmembrane protein 1... 122 7e-28
BC067116-1|AAH67116.1| 74|Homo sapiens chromosome 1 open readi... 48 1e-05
BC066918-1|AAH66918.1| 74|Homo sapiens chromosome 1 open readi... 48 1e-05
BC065186-1|AAH65186.1| 74|Homo sapiens chromosome 1 open readi... 48 1e-05
BC008739-1|AAH08739.1| 74|Homo sapiens chromosome 1 open readi... 48 1e-05
AL356488-5|CAI19043.1| 74|Homo sapiens chromosome 1 open readi... 48 1e-05
AF164793-1|AAF80757.1| 74|Homo sapiens protein x 013 protein. 48 1e-05
>BC107575-1|AAI07576.1| 72|Homo sapiens transmembrane protein 167
protein.
Length = 72
Score = 122 bits (294), Expect = 7e-28
Identities = 54/71 (76%), Positives = 59/71 (83%)
Frame = +1
Query: 139 MSAIFNFQXXXXXXXXXICTCAYLRSFFPSIMDRNKTGLLGTFWKCARIGERKSPYVAVC 318
MSAIFNFQ ICTCAY+RS PS++DRNKTGLLG FWKCARIGERKSPYVAVC
Sbjct: 1 MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTGLLGIFWKCARIGERKSPYVAVC 60
Query: 319 CILMAFSILFL 351
CI+MAFSILF+
Sbjct: 61 CIVMAFSILFI 71
>BC028585-1|AAH28585.1| 72|Homo sapiens transmembrane protein 167
protein.
Length = 72
Score = 122 bits (294), Expect = 7e-28
Identities = 54/71 (76%), Positives = 59/71 (83%)
Frame = +1
Query: 139 MSAIFNFQXXXXXXXXXICTCAYLRSFFPSIMDRNKTGLLGTFWKCARIGERKSPYVAVC 318
MSAIFNFQ ICTCAY+RS PS++DRNKTGLLG FWKCARIGERKSPYVAVC
Sbjct: 1 MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTGLLGIFWKCARIGERKSPYVAVC 60
Query: 319 CILMAFSILFL 351
CI+MAFSILF+
Sbjct: 61 CIVMAFSILFI 71
>BC026285-1|AAH26285.1| 72|Homo sapiens transmembrane protein 167
protein.
Length = 72
Score = 122 bits (294), Expect = 7e-28
Identities = 54/71 (76%), Positives = 59/71 (83%)
Frame = +1
Query: 139 MSAIFNFQXXXXXXXXXICTCAYLRSFFPSIMDRNKTGLLGTFWKCARIGERKSPYVAVC 318
MSAIFNFQ ICTCAY+RS PS++DRNKTGLLG FWKCARIGERKSPYVAVC
Sbjct: 1 MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTGLLGIFWKCARIGERKSPYVAVC 60
Query: 319 CILMAFSILFL 351
CI+MAFSILF+
Sbjct: 61 CIVMAFSILFI 71
>BC067116-1|AAH67116.1| 74|Homo sapiens chromosome 1 open reading
frame 119 protein.
Length = 74
Score = 48.4 bits (110), Expect = 1e-05
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 MSAIFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLGTFWKCARIGERKSPYVA 312
M+ +++ +CTCAY + + + K G+ G F+K A IG R VA
Sbjct: 1 MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60
Query: 313 VCCILMAFSILFL 351
+ C++MAF +LF+
Sbjct: 61 IACVVMAFYVLFI 73
>BC066918-1|AAH66918.1| 74|Homo sapiens chromosome 1 open reading
frame 119 protein.
Length = 74
Score = 48.4 bits (110), Expect = 1e-05
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 MSAIFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLGTFWKCARIGERKSPYVA 312
M+ +++ +CTCAY + + + K G+ G F+K A IG R VA
Sbjct: 1 MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60
Query: 313 VCCILMAFSILFL 351
+ C++MAF +LF+
Sbjct: 61 IACVVMAFYVLFI 73
>BC065186-1|AAH65186.1| 74|Homo sapiens chromosome 1 open reading
frame 119 protein.
Length = 74
Score = 48.4 bits (110), Expect = 1e-05
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 MSAIFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLGTFWKCARIGERKSPYVA 312
M+ +++ +CTCAY + + + K G+ G F+K A IG R VA
Sbjct: 1 MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60
Query: 313 VCCILMAFSILFL 351
+ C++MAF +LF+
Sbjct: 61 IACVVMAFYVLFI 73
>BC008739-1|AAH08739.1| 74|Homo sapiens chromosome 1 open reading
frame 119 protein.
Length = 74
Score = 48.4 bits (110), Expect = 1e-05
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 MSAIFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLGTFWKCARIGERKSPYVA 312
M+ +++ +CTCAY + + + K G+ G F+K A IG R VA
Sbjct: 1 MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60
Query: 313 VCCILMAFSILFL 351
+ C++MAF +LF+
Sbjct: 61 IACVVMAFYVLFI 73
>AL356488-5|CAI19043.1| 74|Homo sapiens chromosome 1 open reading
frame 119 protein.
Length = 74
Score = 48.4 bits (110), Expect = 1e-05
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 MSAIFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLGTFWKCARIGERKSPYVA 312
M+ +++ +CTCAY + + + K G+ G F+K A IG R VA
Sbjct: 1 MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60
Query: 313 VCCILMAFSILFL 351
+ C++MAF +LF+
Sbjct: 61 IACVVMAFYVLFI 73
>AF164793-1|AAF80757.1| 74|Homo sapiens protein x 013 protein.
Length = 74
Score = 48.4 bits (110), Expect = 1e-05
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 MSAIFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLGTFWKCARIGERKSPYVA 312
M+ +++ +CTCAY + + + K G+ G F+K A IG R VA
Sbjct: 1 MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60
Query: 313 VCCILMAFSILFL 351
+ C++MAF +LF+
Sbjct: 61 IACVVMAFYVLFI 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,711,293
Number of Sequences: 237096
Number of extensions: 981530
Number of successful extensions: 2087
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2081
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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