Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_H10
(577 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 23 1.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 1.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 1.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 1.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 1.9
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 3.3
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 22 3.3
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 5.7
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 21 9.9
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 9.9
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 21 9.9
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 21 9.9
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 23.4 bits (48), Expect = 1.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 546 SIPSSSSPFDAQAFSWKAFSSLGH 475
SI +S +PF Q F+ S LGH
Sbjct: 245 SIHNSINPFLGQGFAVPGLSPLGH 268
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 1.9
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 140 KERVYSIPSLQRRRWSLCSSKAVW-HNTGSLAQEIR 244
K+ + +PS +R W C A W GSL + R
Sbjct: 117 KQFIVKLPSAERVAWMWCLIFAFWVPQLGSLFRSSR 152
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 1.9
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 140 KERVYSIPSLQRRRWSLCSSKAVW-HNTGSLAQEIR 244
K+ + +PS +R W C A W GSL + R
Sbjct: 117 KQFIVKLPSAERVAWMWCLIFAFWVPQLGSLFRSSR 152
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.0 bits (47), Expect = 1.9
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 140 KERVYSIPSLQRRRWSLCSSKAVW-HNTGSLAQEIR 244
K+ + +PS +R W C A W GSL + R
Sbjct: 117 KQFIVKLPSAERVAWMWCLIFAFWVPQLGSLFRSSR 152
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.0 bits (47), Expect = 1.9
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 140 KERVYSIPSLQRRRWSLCSSKAVW-HNTGSLAQEIR 244
K+ + +PS +R W C A W GSL + R
Sbjct: 117 KQFIVKLPSAERVAWMWCLIFAFWVPQLGSLFRSSR 152
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 60 SHTYXPAMAIRKXPLRRAVRYLKNVIEKKECIPFR 164
++T R PLR AV ++ ++I +P R
Sbjct: 49 AYTNRELYGTRALPLRSAVEHIPDLIADSRRLPLR 83
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/22 (31%), Positives = 10/22 (45%)
Frame = +2
Query: 53 HFKSHIXARNGNQEXAAPSCCS 118
H H+ NGN + + CS
Sbjct: 389 HLAKHVKTHNGNGKKGSSDSCS 410
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 217 HRVAGPRNPPNSSCSY 264
H+ GPR+PP+ S +
Sbjct: 352 HQNFGPRHPPDCSMEF 367
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +2
Query: 326 PHSGKSRALPTQTYIPCSRSHQPLHVVS 409
P R+ P Q+ + S H+PL + +
Sbjct: 224 PTKSSPRSSPVQSDVSLSPVHEPLLITT 251
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 19 IMQSAWFKPPCSL 57
++QS W P C L
Sbjct: 559 VLQSLWASPTCDL 571
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -3
Query: 434 AETYFDVAGRRHVGVDATVST 372
A +FD++ +G+ AT++T
Sbjct: 325 AANFFDISRSTFLGILATITT 345
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = +2
Query: 386 HQPLHVVSLPHRSMSQRTRRC 448
HQ H ++ H +S RC
Sbjct: 314 HQQHHQQNMSHEELSAMVNRC 334
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,626
Number of Sequences: 336
Number of extensions: 2604
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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