Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_H06
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 101 4e-22
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 73 1e-13
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 73 1e-13
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 73 2e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 73 2e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 73 2e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 72 5e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 72 5e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 72 5e-13
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 43 2e-04
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 43 2e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 43 2e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 43 2e-04
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 40 0.001
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 40 0.001
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 40 0.001
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 40 0.001
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 40 0.002
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 40 0.002
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 40 0.002
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 39 0.003
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.009
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.009
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.012
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 37 0.016
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.037
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 35 0.064
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 34 0.085
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 34 0.085
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 33 0.26
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.26
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.45
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 32 0.45
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 31 0.60
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 31 0.79
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 30 1.4
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 30 1.8
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 30 1.8
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 30 1.8
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 1.8
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.4
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 2.4
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 2.4
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 2.4
Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical pr... 29 3.2
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 3.2
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.2
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.2
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 4.2
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL110477-14|CAB54336.2| 224|Caenorhabditis elegans Hypothetical... 29 4.2
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 29 4.2
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.2
AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical ... 29 4.2
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 5.6
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 28 5.6
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 7.4
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 28 7.4
Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 9.8
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 27 9.8
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 9.8
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 9.8
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 27 9.8
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 101 bits (243), Expect = 4e-22
Identities = 58/159 (36%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Frame = +3
Query: 153 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD---- 320
MS CYKC + GH +R C G G C+ C TGHF+RDC +
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRG-GGGGSTCYNCQETGHFSRDCPKGGSGGGQ 59
Query: 321 --------RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNC 476
CY C G GH +R+C PS + +G E GR Q CYNC
Sbjct: 60 RGGGGGGGSCYNCGGRGHYSRDC------PSARSEGGSGGYGGRGGE-GRSFGGQKCYNC 112
Query: 477 NKSGHISRNCPDG----TKTCYVCGKPGHISRECDEARN 581
+SGHISR C + K CY C + GHISR+C N
Sbjct: 113 GRSGHISRECTESGSAEEKRCYQCQETGHISRDCPSQTN 151
Score = 81.4 bits (192), Expect = 6e-16
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 37/132 (28%)
Frame = +3
Query: 315 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 461
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 462 ------TCYNCNKSGHISRNCPD--------------------GTKTCYVCGKPGHISRE 563
+CYNC GH SR+CP G + CY CG+ GHISRE
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRE 121
Query: 564 CDEARN*PQPPC 599
C E+ + + C
Sbjct: 122 CTESGSAEEKRC 133
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/124 (33%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 338
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 339 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCP 509
GH A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 510 DGTK 521
K
Sbjct: 682 TRPK 685
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +3
Query: 264 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 428
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 429 CPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 566
C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 631 CDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 62.5 bits (145), Expect = 3e-10
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Frame = +3
Query: 276 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRE 449
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 450 SATQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHISREC--DEARN*PQPPC 599
C NC GH + +C D K C CG+ GH +++C + R P PC
Sbjct: 613 VPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CY 329
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 330 RCNGTGHIARECAQSPDE 383
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.037
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 525 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 617
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/124 (33%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 338
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 339 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCP 509
GH A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 510 DGTK 521
K
Sbjct: 682 TRPK 685
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +3
Query: 264 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 428
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 429 CPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 566
C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 631 CDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 62.5 bits (145), Expect = 3e-10
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Frame = +3
Query: 276 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRE 449
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 450 SATQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHISREC--DEARN*PQPPC 599
C NC GH + +C D K C CG+ GH +++C + R P PC
Sbjct: 613 VPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CY 329
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 330 RCNGTGHIARECAQSPDE 383
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.037
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 525 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 617
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +3
Query: 240 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 398
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 399 CNKTGHIARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 548
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 549 HISREC 566
H S EC
Sbjct: 272 HRSNEC 277
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 344
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 345 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 476
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 477 NKSGHISRNCPDGTK 521
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 438 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 578
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +3
Query: 165 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 263
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 264 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 386
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 525 CYVCGKPGHISRECDEARN*PQP 593
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +3
Query: 240 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 398
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 399 CNKTGHIARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 548
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 549 HISREC 566
H S EC
Sbjct: 272 HRSNEC 277
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 344
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 345 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 476
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 477 NKSGHISRNCPDGTK 521
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 438 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 578
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +3
Query: 165 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 263
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 264 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 386
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 525 CYVCGKPGHISRECDEARN*PQP 593
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +3
Query: 240 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 398
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 399 CNKTGHIARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 548
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 549 HISREC 566
H S EC
Sbjct: 272 HRSNEC 277
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 344
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 345 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 476
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 477 NKSGHISRNCPDGTK 521
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 438 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 578
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +3
Query: 165 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 263
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 264 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 386
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 525 CYVCGKPGHISRECDEARN*PQP 593
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +3
Query: 252 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 395
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 396 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 566
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 62.5 bits (145), Expect = 3e-10
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +3
Query: 165 VCYKCNRTGHFARECTQ--------GGVVSRDSGF--NRQREKCFKCNRTGHFARDCKEE 314
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 315 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRESATQTCYNCN 479
+ + N G + Q E +C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 480 KSGHISRNCPDGTK 521
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 165 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 329
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 330 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 434
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 387 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 521
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.0 bits (134), Expect = 6e-09
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 341
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 342 -------------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 461
TG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 462 TCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 578
C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 344
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 345 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 482
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 483 SGHISRNCPDGTK 521
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +3
Query: 282 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 437
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 438 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 572
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 444 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 578
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 282 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 452
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 453 ATQTCYNCNKSG 488
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +3
Query: 252 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 371
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 483 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 593
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +3
Query: 252 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 395
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 396 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 566
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 62.5 bits (145), Expect = 3e-10
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +3
Query: 165 VCYKCNRTGHFARECTQ--------GGVVSRDSGF--NRQREKCFKCNRTGHFARDCKEE 314
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 315 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRESATQTCYNCN 479
+ + N G + Q E +C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 480 KSGHISRNCPDGTK 521
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 165 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 329
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 330 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 434
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 387 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 521
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.0 bits (134), Expect = 6e-09
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 341
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 342 -------------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 461
TG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 462 TCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 578
C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 344
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 345 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 482
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 483 SGHISRNCPDGTK 521
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +3
Query: 282 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 437
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 438 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 572
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 444 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 578
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 282 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 452
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 453 ATQTCYNCNKSG 488
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +3
Query: 252 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 371
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 483 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 593
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +3
Query: 252 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 395
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 396 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 566
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 62.5 bits (145), Expect = 3e-10
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +3
Query: 165 VCYKCNRTGHFARECTQ--------GGVVSRDSGF--NRQREKCFKCNRTGHFARDCKEE 314
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 315 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRESATQTCYNCN 479
+ + N G + Q E +C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 480 KSGHISRNCPDGTK 521
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 165 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 329
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 330 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 434
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 387 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 521
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.0 bits (134), Expect = 6e-09
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 341
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 342 -------------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 461
TG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 462 TCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 578
C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 344
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 345 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 482
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 483 SGHISRNCPDGTK 521
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +3
Query: 282 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 437
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 438 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 572
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 444 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 578
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 282 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 452
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 453 ATQTCYNCNKSG 488
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +3
Query: 252 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 371
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 483 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 593
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 60.5 bits (140), Expect = 1e-09
Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Frame = +3
Query: 216 GGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 386
G V D+ +R K + R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 387 SCYNCNKTGHIARNCPEGGRESATQ-TCYNCNKSGHISRNC--------PDGTKTCYVCG 539
C+ C H C + G + TC+ C + GHISR+C PDG C VCG
Sbjct: 255 VCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDG-GCCNVCG 313
Query: 540 KPGHISRECDE 572
H+ R+C E
Sbjct: 314 ANTHLRRDCPE 324
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Frame = +3
Query: 153 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR--- 323
++ S C+ C GH +C + S D CFKC H +CK++ +
Sbjct: 226 ITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGFP 278
Query: 324 ---CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRESA 455
C+ C GHI+R+C Q+ PD C C H+ R+CPE + A
Sbjct: 279 YATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPELAAQKA 330
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 387 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC-PDGTK-----TCYVCGKPG 548
+C++C + GH +CP+ S+ C+ C H C G K TC+VC + G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 549 HISRECDEARN 581
HISR+C + N
Sbjct: 290 HISRDCHQNVN 300
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 48.4 bits (110), Expect = 5e-06
Identities = 38/145 (26%), Positives = 52/145 (35%), Gaps = 2/145 (1%)
Frame = +3
Query: 171 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 350
+ C R H + +C + V+ F + K CN H C E D + C G H
Sbjct: 386 HNCERICH-SGDCGECTVILEQDCFCGKTPKEVSCNPCAHEKYSCGSECDGMFSC-GIHH 443
Query: 351 IARECAQSPDEPSCYNCNKTGHIARNCPEGGR--ESATQTCYNCNKSGHISRNCPDGTKT 524
++C + C C + R CP G +S T C + D T
Sbjct: 444 CTKKC----HDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLT 499
Query: 525 CYVCGKPGHISRECDEARN*PQPPC 599
C GK H +C E P PPC
Sbjct: 500 CGTPGKNHHCREKCHEG---PCPPC 521
Score = 32.3 bits (70), Expect = 0.34
Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Frame = -3
Query: 516 CRRDSCGRCGRTC-----CSYSRSASQTPAPPRDSSVRCGPSCCS-CNMTARPGSVRTRA 355
C CG C C R+ Q+ R P+C S C+ G T
Sbjct: 448 CHDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG---TPG 504
Query: 354 LCAQCRYICSNGQPLPCNPSQSVLCGC 274
CR C G PCN + SV+C C
Sbjct: 505 KNHHCREKCHEGPCPPCNLNTSVICRC 531
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 432 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 593
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 159
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 321 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 449
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 261 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 371
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 432 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 593
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 321 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 449
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 261 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 371
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 432 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 593
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 321 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 449
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 261 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 371
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 432 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 593
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 321 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 449
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 261 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 371
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 456 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 596
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 264 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 368
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.049
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 387 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 521
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 315 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 470
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 159 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 305
S+ C+ C + GH A EC+ QRE C C H A +C
Sbjct: 201 SNTCFNCKKYGHRATECSA-----------PQRE-CANCGDPNHRANEC 237
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 456 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 596
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 264 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 368
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.049
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 387 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 521
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 315 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 470
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 159 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 305
S+ C+ C + GH A EC+ QRE C C H A +C
Sbjct: 201 SNTCFNCKKYGHRATECSA-----------PQRE-CANCGDPNHRANEC 237
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/83 (33%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = -3
Query: 516 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCG-PSCCSCNMTARPGSVRTRALCAQC 340
C S G CG+TCC APP S CG P C C V T C C
Sbjct: 66 CGCGSMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCKCC 114
Query: 339 RYICSNGQPLPCNPSQSVLCGCT 271
+ +C+N C CGCT
Sbjct: 115 QPVCTNA----CTNGGGCSCGCT 133
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 369 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 545
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 683
Query: 546 GHISREC 566
GHI+ C
Sbjct: 684 GHIAWNC 690
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +3
Query: 258 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 422
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 423 RNCPE 437
NCP+
Sbjct: 688 WNCPK 692
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 315 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 485
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 486 GHISRNCP 509
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 159 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 335
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 628 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 680
Query: 336 NGTGHIARECAQSPDEPS 389
N GHIA C + + S
Sbjct: 681 NEMGHIAWNCPKKNENTS 698
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 369 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 545
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 586
Query: 546 GHISREC 566
GHI+ C
Sbjct: 587 GHIAWNC 593
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +3
Query: 258 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 422
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 423 RNCPE 437
NCP+
Sbjct: 591 WNCPK 595
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 315 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 485
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 486 GHISRNCP 509
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 159 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 335
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 531 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 583
Query: 336 NGTGHIARECAQSPDEPS 389
N GHIA C + + S
Sbjct: 584 NEMGHIAWNCPKKNENTS 601
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 369 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 545
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 597
Query: 546 GHISREC 566
GHI+ C
Sbjct: 598 GHIAWNC 604
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +3
Query: 258 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 422
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 423 RNCPE 437
NCP+
Sbjct: 602 WNCPK 606
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 315 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 485
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 486 GHISRNCP 509
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 159 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 335
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 542 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 594
Query: 336 NGTGHIARECAQSPDEPS 389
N GHIA C + + S
Sbjct: 595 NEMGHIAWNCPKKNENTS 612
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 338
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 339 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI 494
T + A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 495 ----SRNCPDGTKTCYVC 536
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.45
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +3
Query: 186 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 350
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 351 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 518
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 519 KTC 527
C
Sbjct: 2005 GGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 338
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 339 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI 494
T + A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 495 ----SRNCPDGTKTCYVC 536
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.45
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +3
Query: 186 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 350
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 351 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 518
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 519 KTC 527
C
Sbjct: 2005 GGC 2007
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 338
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 339 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI 494
T + A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 495 ----SRNCPDGTKTCYVC 536
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.45
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +3
Query: 186 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 350
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 351 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 518
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 519 KTC 527
C
Sbjct: 2005 GGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 338
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 339 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI 494
T + A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 495 ----SRNCPDGTKTCYVC 536
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.45
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +3
Query: 186 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 350
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 351 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 518
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 519 KTC 527
C
Sbjct: 2005 GGC 2007
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 387 SCYNCNKTGHIARNCPE-GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRE 563
+C+NC++ GH A CP G+ Q ++ I TCY CG+ GH +
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 564 C 566
C
Sbjct: 265 C 265
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +3
Query: 294 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 473
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 474 CNKSGHISRNCPDG 515
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 35.1 bits (77), Expect = 0.049
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +3
Query: 264 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARN 428
C C+ GH A C + R N H + + PD+ + CY C + GH A
Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 429 CPEGGRESATQTCY 470
C +G + T +
Sbjct: 265 CHKGALAFLSNTAH 278
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Frame = +3
Query: 126 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQR-------EK------- 263
A +KP + C+ C+ GH A C +R + + R +K
Sbjct: 192 AVSHAKPTYSQAITCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVT 251
Query: 264 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE 362
C+KC GH+A C + A + N T H+A E
Sbjct: 252 CYKCGEKGHYANRCHKGA-LAFLSN-TAHLAHE 282
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 390 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 506
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 285 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 440
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.049
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +3
Query: 465 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 566
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCK 308
C C H + EC V+ KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQI-------KCTNCGAFGHISKDCK 469
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 390 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 506
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 285 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 440
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.049
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +3
Query: 465 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 566
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCK 308
C C H + EC V+ KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQI-------KCTNCGAFGHISKDCK 469
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.012
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 459 QTCYNCNKSGHISRNCPDG 515
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.037
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 387 SCYNCNKTGHIARNCPEG 440
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.45
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 153 MSSSVCYKCNRTGHFARECTQG 218
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 31.1 bits (67), Expect = 0.79
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 519 KTCYVCGKPGHISREC 566
+ CY C +PGHISR C
Sbjct: 4 RNCYKCQQPGHISRNC 19
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 264 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 353
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +3
Query: 315 ADR-CYRCNGTGHIAREC 365
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 36.7 bits (81), Expect = 0.016
Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Frame = +3
Query: 201 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 380
R C Q + + GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQP 881
Query: 381 E----PSCYNCNKTGHIARNCPEGGRESATQTCYNCN--KSGHISRNCPDG 515
P C C H A C + ++ C C +GH C DG
Sbjct: 882 GFWGFPECRTCQCNDH-ANIC-----DQSSGACIECRDLTTGHYCDRCQDG 926
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 324 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 488
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.34
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 384 PSCYNCNKTGHIARNCPEGGRES 452
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 3.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 465 CYNCNKSGHISRNCPDGT 518
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 260
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 34.7 bits (76), Expect = 0.064
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = -3
Query: 513 RRDSCGRCGRTCCSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNMTARPGSVRTRA 355
RR CGR +CCS S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 354 LCAQCRYICSNGQPLP 307
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 324 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 503
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 324 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 503
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 33.5 bits (73), Expect = 0.15
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = -3
Query: 504 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNMTA---RPGSVRTRALC-AQ 343
S +C TC S S+ TP P + V+C PSC +C + P +V+ C Q
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQ 158
Query: 342 CRYICSNGQPL-PCNPSQSVLC 280
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 32.7 bits (71), Expect = 0.26
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = -3
Query: 504 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNMTA---RPGSVRTRALC-AQ 343
S +C TC S S+ TP P + V+C PSC +C + P V+ C Q
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQ 158
Query: 342 CRYICSNGQPL-PCNPSQSVLC 280
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 351 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 515
+ R+C Q +P + C+ C++ GH +CP+ + + N + R+ G
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSG 1398
Score = 31.1 bits (67), Expect = 0.79
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +3
Query: 201 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 380
R+C QG + +RQ C +C+R GHF C + A AR+ S
Sbjct: 1344 RKCNQGSAPT-----DRQ---CHQCHRIGHFVESCPQRA--------LAKEARKRFGSNS 1387
Query: 381 EPSCYNCNKTGHIARNCPEGG 443
S Y N +G +N EGG
Sbjct: 1388 TNSSYRSNDSGRGFKNGEEGG 1408
Score = 31.1 bits (67), Expect = 0.79
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVV--SRDSGFNRQREKCFKCNRTGHFARDCKEEADR 323
C++C+R GHF C Q + +R + ++ N +G ++ +E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 375 PDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCP 509
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +3
Query: 159 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 323
+ +C +C + G C+ + + R +CF C GH + C + DR
Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +3
Query: 324 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 437
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 31.9 bits (69), Expect = 0.45
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +3
Query: 162 SVCYKCNRTGHFAR--ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 335
S C C+ T H R EC R+ CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370
Query: 336 NGTGH 350
G H
Sbjct: 371 KGNHH 375
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Frame = +3
Query: 390 CYNCNKTGHIARN--CP-----EGGRESATQT--CYNCNKSGHISRNCPDGTKTCYVCGK 542
C C+ T H+ R+ CP E + A + C+ C +SGH C +TC C K
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC-K 371
Query: 543 PGHISREC 566
H + C
Sbjct: 372 GNHHTVFC 379
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Frame = -3
Query: 504 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSC---CS--CNMTARPGSVRTRALCAQC 340
+C +C +C + + + +C P C C C A C
Sbjct: 231 NCQQCQNSCQNSNTQTITIYVQASPQTSQCVPQCQQQCQQQCQTRTTASQQCAPACSTSC 290
Query: 339 RYICSNGQPLPCNPSQSVLCGC 274
C+ + C P Q+ CGC
Sbjct: 291 NQSCNQPAQMACQPMQNSQCGC 312
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 31.1 bits (67), Expect = 0.79
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 419 RTELSRGGAGVCDADLL*LQQVRPHLPQLSRRHQDVL-RVRQARPHLARVRRGAELAAAT 595
RT L R G + ++V LP SR +DV+ + RQA P + RRG +++
Sbjct: 643 RTTLPRSGTAQWKNEYSDGEEVTEKLPVESRDWRDVINQQRQAAPGNSADRRGIAATSSS 702
Query: 596 LSPLQSTMYIMMPRTDDKQ 652
LS L S + M + +++
Sbjct: 703 LSNLPSYINRRMEKERERE 721
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 303 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 479
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 480 KSGHISRNCPDGTKTC 527
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 303 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 479
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 480 KSGHISRNCPDGTKTC 527
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 516 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 394
CR C C RTCC + T P CG CC C
Sbjct: 79 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 116
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 516 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 394
CR C C RTCC + T P CG CC C
Sbjct: 82 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 119
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 507 PD-GTKTCYVCGKPGHISRECDEAR 578
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 507 PD-GTKTCYVCGKPGHISRECDEAR 578
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 507 PD-GTKTCYVCGKPGHISRECDEAR 578
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 495 RCGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALC-AQCRYICSN 322
RC TC + + P P PR S+ C PSC P V+ +LC QCR +C+N
Sbjct: 240 RCLPTCIQQIQISVPLPPPAPRCDSM-CMPSC-------SPSCVQQYSLCPQQCRPMCTN 291
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 275
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 249 RQREKCFKCNRTGHFARDCKEEA 317
R + +C C GH AR+CK++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 465 CYNCNKSGHISRNCPDGTKTCYVC 536
C NCNK+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 465 CYNCNKSGHISRNCP 509
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 390 CYNCNKTGHIARNCPE 437
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 294 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 437
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = -3
Query: 492 CGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ-CRYICSNG 319
C +TC + S +Q AP P C P+C + P +V+ C Q C C
Sbjct: 107 CQQTCQT-SSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQCVPQCQQKCTQQCVQA 165
Query: 318 QPL-PCNPSQSVLC 280
QP+ C P C
Sbjct: 166 QPIQQCQPQCQQQC 179
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = -3
Query: 492 CGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ-CRYICSNG 319
C +TC + S +Q AP P C P+C + P +V+ C Q C C
Sbjct: 108 CQQTCQT-SSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQCVPQCQQKCTQQCVQA 166
Query: 318 QPL-PCNPSQSVLC 280
QP+ C P C
Sbjct: 167 QPIQQCQPQCQQQC 180
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 465 CYNCNKSGHISRNCPDGTKTCYVC 536
C NCNK+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
>Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical
protein F09C6.10 protein.
Length = 153
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/76 (22%), Positives = 26/76 (34%)
Frame = +3
Query: 333 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 512
C + E P +P C N+ + C G + T CN+ +I N
Sbjct: 36 CQSKCGVPLEIRMKPTKPGCKKWNECDDNEKQCASGPKLQIIYTNNVCNQFVNICENREY 95
Query: 513 GTKTCYVCGKPGHISR 560
CG P +S+
Sbjct: 96 ANWNMQKCGIPHVVSK 111
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 309 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 416
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 3/72 (4%)
Frame = -3
Query: 486 RTCCSYSRSASQTPAPPRDSSVRCGPS-CCSCNMTARP--GSVRTRALCAQCRYICSNGQ 316
RTCC A+ P PP P+ CC R S C R C
Sbjct: 130 RTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCGCGRPCCYYQN 189
Query: 315 PLPCNPSQSVLC 280
P CN Q C
Sbjct: 190 PTCCNQGQKACC 201
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 516 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 394
CR C C RTCC +R + CG CC C
Sbjct: 77 CRPKCCCTCCRTCCC-TRCCTCCRPCCCGCGCGCGCGCCGC 116
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 516 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 394
CRR C C RTCC + T P CG CC C
Sbjct: 95 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 130
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.2
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 297 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 473
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 474 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 575
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.2
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 297 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 473
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 474 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 575
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.2
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 297 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 473
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 474 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 575
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.2
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 297 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 473
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 474 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 575
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 516 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 394
CRR C C RTCC + T P CG CC C
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 131
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 516 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 394
CRR C C RTCC + T P CG CC C
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 131
>AL110477-14|CAB54336.2| 224|Caenorhabditis elegans Hypothetical
protein Y113G7B.24 protein.
Length = 224
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = +2
Query: 416 HRTELSRGGAGVCDADLL*LQQVRPHLPQLSRRHQDVLRVRQARPHL---ARVRRGAELA 586
HR EL R G D LQ++ + +H+ R + + L + ++ E A
Sbjct: 80 HRVELQRIGFITSDYVRCRLQKIESNPHDAIDQHKK--RKEEGKSDLLSESEMKFAEEYA 137
Query: 587 AATLSPLQSTMYIMMPRTDDKQRTPRATHDNRLQY 691
A + Q T+ MP K PR HD+ + Y
Sbjct: 138 LAESNLFQKTVLEFMPAALKKMPVPRGDHDDVMVY 172
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +3
Query: 168 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN-GT 344
CY C + GH A EC + D N +R+ + + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 345 GHIARECAQSPDEPS 389
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 525 CYVCGKPGHISREC 566
CY CGK GH + EC
Sbjct: 411 CYYCGKRGHTANEC 424
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.2
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 297 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 473
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 474 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 575
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical
protein Y59E9AL.5 protein.
Length = 99
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = -3
Query: 411 PSCCSCNMTARPGSVRTRAL----CAQCRYICSNGQPLPCNPSQSVLCGCT 271
P+CC+C M + S T+ C C S + C+P S C CT
Sbjct: 49 PTCCACWMRRKKESTTTKVCVQDDCTTCS-CTSASRCSRCSPCCSGCCSCT 98
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 441 GRESATQTCYNCNKSGHISRNCP 509
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 441 GRESATQTCYNCNKSGHISRNCP 509
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +3
Query: 303 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 479
C+E+ D C + C D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 480 KSGHISRNCPDGTKTC 527
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 429 CPEGGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN 581
CP ++ QTC + + R C + + C +C P HI+ C A++
Sbjct: 925 CPPCKKDHPLQTC--TMGAIEVKRFCINNGR-CTICSSPSHITGNCSYAQS 972
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 360 RALCAQCRYICSNGQPLPCNPSQSVLCGC 274
R++C +C C N P P NP ++ C
Sbjct: 42 RSVCQECPSCCGNDGPQPFNPVFNIHFNC 70
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = -3
Query: 489 GRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ 343
G C + S P C P CC C+ A+PG A A+
Sbjct: 13 GTLACFPTSQRSYQYGAPTQQFAACTPQCCGCSQ-AQPGPQPAAAAAAR 60
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -3
Query: 501 CGRCGRTCCSYSRSASQTPAPPRDSSVRC 415
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Frame = -3
Query: 495 RCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCA-----QCRYI 331
+C C ++ PP SS C SC P V+ + +CA C+
Sbjct: 292 KCSSQCVEQQQAQIVVVQPPTSSSNNCASSCMP---QCTPQCVQQQTICAAACQPSCQSS 348
Query: 330 C-SNGQPL-PCNPSQSVLC 280
C SN Q + C PS C
Sbjct: 349 CSSNAQCVQACLPSCESSC 367
>Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical
protein F02H6.7 protein.
Length = 334
Score = 27.5 bits (58), Expect = 9.8
Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 7/115 (6%)
Frame = +3
Query: 273 CNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDE-PSCYNCNKTGHIARN----CPE 437
C + ++ C +A R NG G A C +P + Y+C A CP
Sbjct: 103 CVGSTRISQPCGTQACNYPRTNGPG--APCCIGTPKVINNWYHCGSNSQNAAPTQPCCPV 160
Query: 438 GGRESA-TQTCYN-CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQPP 596
GG + T+ +N N SR+C G C G+ EC P PP
Sbjct: 161 GGVWTEWTRWAHNGANVEWSRSRDCISGGYNCACIGENQETKFECPCTPMKPIPP 215
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +3
Query: 258 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 437
E C NR+G + D + D C + + D C C K+ H+ +C
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHL--SCDS 112
Query: 438 GGRESATQ-TCYNCNK 482
S C +C +
Sbjct: 113 SDVSSLNNFVCISCRR 128
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 9.8
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Frame = +3
Query: 213 QGGVVSRDSGFNRQREKCFKCNRTGHFARD----CKEEADRCYRCNGTGHIAREC----- 365
+GG + N + C +C + G++ +E+A R C+ G ++ C
Sbjct: 382 EGGGRCLECAHNTEGFNCERC-KDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQ 440
Query: 366 -AQSPDEPSCYNCNKT--GHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 515
A++ +P C G C G R T CN++G ++ + DG
Sbjct: 441 SAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +3
Query: 258 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 437
E C NR+G + D + D C + + D C C K+ H+ +C
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHL--SCDS 112
Query: 438 GGRESATQ-TCYNCNK 482
S C +C +
Sbjct: 113 SDVSSLNNFVCISCRR 128
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +3
Query: 417 IARNCPEG------GRESATQTCYNCNKSGHISRNCPDGTKTCY 530
++ CP G G S C N +G +S CPDG TCY
Sbjct: 682 LSEACPPGTVVAKDGDGSRLVQCSNPGGNGRVSGGCPDG-YTCY 724
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical protein
ZK287.4 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = -3
Query: 507 DSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCC-SCNMTARPGSVRTRALCAQCR-Y 334
DS C TC + S P + P+ S +T+ P + R +C Q
Sbjct: 1018 DSLTDCLETCVANGIKFSSLANSPMSAVPPPPPTLMPSPPVTSSPFTFVPRNMCPQGDPL 1077
Query: 333 ICSNGQPLPCNPSQSVLC 280
I +G P+ C+PS++ C
Sbjct: 1078 ITVDGTPIQCDPSKAAKC 1095
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 507 PDGTKTCYVCGKPGHISRECDEARN 581
P+ + C +CG+ GH +EC A N
Sbjct: 258 PNQPRACDLCGQYGHELKECRGAEN 282
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 9.8
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Frame = +3
Query: 213 QGGVVSRDSGFNRQREKCFKCNRTGHFARD----CKEEADRCYRCNGTGHIAREC----- 365
+GG + N + C +C + G++ +E+A R C+ G ++ C
Sbjct: 382 EGGGRCLECAHNTEGFNCERC-KDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQ 440
Query: 366 -AQSPDEPSCYNCNKT--GHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 515
A++ +P C G C G R T CN++G ++ + DG
Sbjct: 441 SAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.5 bits (58), Expect = 9.8
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Frame = +3
Query: 213 QGGVVSRDSGFNRQREKCFKCNRTGHFARD----CKEEADRCYRCNGTGHIAREC----- 365
+GG + N + C +C + G++ +E+A R C+ G ++ C
Sbjct: 382 EGGGRCLECAHNTEGFNCERC-KDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQ 440
Query: 366 -AQSPDEPSCYNCNKT--GHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 515
A++ +P C G C G R T CN++G ++ + DG
Sbjct: 441 SAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 486 RTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRA 355
RTCC SA+ P+ S + C P CN AR ++R A
Sbjct: 149 RTCCGCVSSAASGPS---SSLILCFPGGRRCNTHARTEALRGTA 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,182,877
Number of Sequences: 27780
Number of extensions: 329740
Number of successful extensions: 1682
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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