Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_H04
(693 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 73 2e-13
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 73 2e-13
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 72 5e-13
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 66 3e-11
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 62 3e-10
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 62 4e-10
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 35 0.053
01_06_0801 - 32085110-32085274,32086318-32086365,32086441-320864... 33 0.22
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 31 0.66
01_04_0003 - 14989160-14989445,14989673-14989807,14991418-149915... 31 0.66
01_07_0294 + 42571700-42573373,42573653-42573720,42573785-425738... 31 0.87
01_01_1204 + 9689855-9690844 30 1.5
09_04_0650 - 19214589-19215106,19215839-19215935,19216100-192161... 30 2.0
12_01_0900 - 8724339-8724380,8725263-8725376,8726491-8726559,872... 29 2.6
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 29 2.6
05_07_0282 + 28934359-28936458 29 4.6
09_04_0420 - 17416548-17416991 28 6.1
08_01_0821 + 7966587-7966832 28 8.1
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 73.3 bits (172), Expect = 2e-13
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
Frame = +1
Query: 124 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKFXX 303
KC CG++VY EE A G +H+ CF+C C+ L +N S EG LYCK + +
Sbjct: 12 KCDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATLQFSNYSSVEGVLYCKPHYDQILKS 71
Query: 304 XXXXXXXXXXCLSMDTGDHLKGENAGGVRTNGACLEPRSIAKAPPG--EGCPRCGGYVYA 477
S++ ++A ++NG +P + G + C C VY
Sbjct: 72 TG----------SLEKSFEGTSKSAKAEKSNGNKGQPNRFSSMFVGTQDKCVVCNKTVYP 121
Query: 478 AEQMLARGRAWHKECFKC--GDCMKRLDSTNCCEGSDKDIYCK 600
E++ G ++HK CF+C G C + EG +YCK
Sbjct: 122 LEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGK---LYCK 161
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +1
Query: 124 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 297
KC C K+VY E+ G +HK CF+C L +N HEG+LYCK H++ F
Sbjct: 111 KCVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQLF 168
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 72.9 bits (171), Expect = 2e-13
Identities = 51/166 (30%), Positives = 71/166 (42%), Gaps = 6/166 (3%)
Frame = +1
Query: 124 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKFXX 303
KC C K+V+ + A G+ +HK CFKC C+ L N S +G LYCK H +
Sbjct: 9 KCKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKT-HFEQ--- 64
Query: 304 XXXXXXXXXXCLSMDTGDHLKGENAGGVRT----NGACLEPRSIAKAPPGEGCPRCGGYV 471
L +TG K + GG + G S A + + C C V
Sbjct: 65 -----------LFKETGSFSKKFSQGGKSSEKSDQGRAPSKLSSAFSGTQDKCAACQKTV 113
Query: 472 YAAEQMLARGRAWHKECFKC--GDCMKRLDSTNCCEGSDKDIYCKV 603
Y E++ G ++HK CFKC G C+ S G +YCK+
Sbjct: 114 YPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGI---LYCKI 156
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 124 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 297
KC C K+VY E+ G +HK CFKC +L +++ + G LYCK+ ++ F
Sbjct: 105 KCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLF 162
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 71.7 bits (168), Expect = 5e-13
Identities = 53/166 (31%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Frame = +1
Query: 124 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKFXX 303
KC C K+V+ + A G+ +HK CFKC C+ +L + S +G LYCK H +
Sbjct: 9 KCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT-HFEQ--- 64
Query: 304 XXXXXXXXXXCLSMDTGDHLKGENAGGVRTNGACL--EPRSIAKAPPG--EGCPRCGGYV 471
L +TG K + A G R+ L P I A G + C C V
Sbjct: 65 -----------LFKETGSFSK-KFAPGCRSTDKELARAPSKICSAFSGTQDKCAACQKTV 112
Query: 472 YAAEQMLARGRAWHKECFKC--GDCMKRLDSTNCCEGSDKDIYCKV 603
Y E++ G ++HK CFKC G C+ S G +YCK+
Sbjct: 113 YPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGV---LYCKI 155
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 124 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 297
KC C K+VY E+ G +HK CFKC +L +++ + G LYCK+ + F
Sbjct: 104 KCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLF 161
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 65.7 bits (153), Expect = 3e-11
Identities = 48/163 (29%), Positives = 65/163 (39%), Gaps = 4/163 (2%)
Frame = +1
Query: 124 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKFXX 303
KC C K+VY ++ G+ +H+ CFKC C+ L N S EG YCK + F
Sbjct: 8 KCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHFEQLFKE 67
Query: 304 XXXXXXXXXXCLSMDTGDHLKGENAGGVRTNGACLEPRSIAKAPPG--EGCPRCGGYVYA 477
S + + A T P A+ G E C C Y
Sbjct: 68 TG----------SYNKSFQSPAKPASEKLTPELTRSPSKAARMFSGTQEKCATCSKTAYP 117
Query: 478 AEQMLARGRAWHKECFKC--GDCMKRLDSTNCCEGSDKDIYCK 600
E++ G+A+HK CFKC G C + EG +YCK
Sbjct: 118 LEKVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGI---LYCK 157
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 62.5 bits (145), Expect = 3e-10
Identities = 44/161 (27%), Positives = 63/161 (39%), Gaps = 2/161 (1%)
Frame = +1
Query: 124 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKFXX 303
KC C K+VY ++ A +HK CF+C C+ L N + EG LYC+ + F
Sbjct: 11 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKR 70
Query: 304 XXXXXXXXXXCLSMDTGDHLKGENAGGVRTNGACLEPRSIAKAPPGEGCPRCGGYVYAAE 483
+ + EN ++ + A R E C C VY E
Sbjct: 71 TGSLDKSFEGTPKVVKPEKTV-ENENAIKVSSAFAGTR--------EKCVGCNKTVYPIE 121
Query: 484 QMLARGRAWHKECFKC--GDCMKRLDSTNCCEGSDKDIYCK 600
++ +HK CFKC G C + EG +YCK
Sbjct: 122 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGK---LYCK 159
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/54 (40%), Positives = 27/54 (50%)
Frame = +1
Query: 124 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCH 285
KC C K+VY E +HK CFKC + +N HEG+LYCK H
Sbjct: 109 KCVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHH 162
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 62.1 bits (144), Expect = 4e-10
Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 5/164 (3%)
Frame = +1
Query: 124 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKFXX 303
KC C K+V+ + A + +HK CF+C C+ L + S +G LYCK H +
Sbjct: 9 KCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKT-HFEQ--- 64
Query: 304 XXXXXXXXXXCLSMDTGDHLKGENAGGVRTNGACLEPRSIAKAPPG--EGCPRCGGYVYA 477
L +TG K +G + P ++ G + C C VY
Sbjct: 65 -----------LFKETGTFKKNFPSGTKANSEQAKIPSKLSSVFCGTQDKCTACKKTVYP 113
Query: 478 AEQMLARGRAWHKECFKC--GDCMKRLDSTNCCEGSDKDI-YCK 600
E+M G +H+ CFKC G C+ TN S I YC+
Sbjct: 114 LEKMTMEGECYHRTCFKCAHGGCL----LTNASYASHNGILYCQ 153
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 35.1 bits (77), Expect = 0.053
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 187 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCH 285
WH CF+C C K + + HE + Y K C+
Sbjct: 277 WHPQCFRCFACNKPISEYEFAMHEDQPYHKSCY 309
>01_06_0801 -
32085110-32085274,32086318-32086365,32086441-32086483,
32086588-32086651,32086740-32086792,32086899-32086937,
32087031-32087113,32087200-32087280
Length = 191
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 103 FKPADNP-KCPKCGK-SVYAAEERVAGGL-KWHKMCFKCGLCQKLLDSTNCSEHEGE 264
+KP P KC KCGK +V A V K +C KC C K L + SE E E
Sbjct: 59 YKPIVEPAKCQKCGKRNVRQAYHNVCTACSKDLGICAKCCTCVKALVGRDLSEQESE 115
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/57 (24%), Positives = 20/57 (35%)
Frame = +1
Query: 127 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 297
C C + G WH CF+C C + + S Y K C+ +F
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERF 614
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = +1
Query: 448 CPRCGGYVYAAEQMLARGRAWHKECFKCGDC 540
C C + + G WH ECF+C C
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHAC 588
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = +1
Query: 124 KCPKCGKSVYAAEERVAGGLKWHKMCF------KCGLCQKLL 231
+C C + +Y E ++G +HK C+ KC +C++ +
Sbjct: 584 RCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPKCDVCKQFI 625
>01_04_0003 -
14989160-14989445,14989673-14989807,14991418-14991508,
14991571-14991712,14991924-14992403,14992610-14993548
Length = 690
Score = 31.5 bits (68), Expect = 0.66
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -3
Query: 568 NSWWSPAVSCSRHI*STPCATPDRE---PTSALQRTHSHRSEDSPRRE 434
N W SP S +R TP +PDR P RTHS + DSPR E
Sbjct: 266 NQWDSPPESSARLEKGTP--SPDRMVSLPVGRSPRTHSPKELDSPRPE 311
>01_07_0294 +
42571700-42573373,42573653-42573720,42573785-42573819,
42573988-42574061,42574491-42574726,42574958-42575044,
42575356-42575455,42575584-42576003
Length = 897
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = -1
Query: 465 ATAARTALAGRSFSDRAGLQTSSVRPHTP--RILALQVVAG 349
A+AARTA+AGR+ + A + T++ TP I L V+AG
Sbjct: 75 ASAARTAMAGRTINGGASMLTTTTTTTTPPHLIQQLMVLAG 115
>01_01_1204 + 9689855-9690844
Length = 329
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 157 AEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHA 288
AEE AGGL + C +C + + +E E E+ C CH+
Sbjct: 2 AEEAAAGGL------YYCHMCASTVSAVAAAEGEVEIKCPYCHS 39
>09_04_0650 -
19214589-19215106,19215839-19215935,19216100-19216189,
19216323-19216436,19217126-19217201,19217329-19217618
Length = 394
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 523 STPCATPDREPTSALQRTHSHRSEDSPRREEL 428
++P PD + ++TH HR EDS R +L
Sbjct: 231 NSPMKLPDATLANQPEKTHCHRDEDSQSRRQL 262
>12_01_0900 -
8724339-8724380,8725263-8725376,8726491-8726559,
8726665-8726824,8726905-8726961,8728080-8728258,
8728332-8728442,8728512-8728535,8729993-8730107,
8730665-8730720,8731595-8731807
Length = 379
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 457 CGGYVYAAEQMLARGRAWH 513
CGG V+ EQML G AWH
Sbjct: 299 CGG-VFIQEQMLVNGHAWH 316
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/46 (23%), Positives = 19/46 (41%)
Frame = +1
Query: 403 CLEPRSIAKAPPGEGCPRCGGYVYAAEQMLARGRAWHKECFKCGDC 540
C ++ A++ C C + + G WH +CF+C C
Sbjct: 99 CAPSQTQARSRGYRVCGGCKHEIGHGHYLSCLGMYWHPQCFRCSSC 144
>05_07_0282 + 28934359-28936458
Length = 699
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 92 AQCLSNPLITRSARNVANQFTPLRSAWLVASNGTKCASNVVCAKNCWTQPTAQSTRVNC 268
A S PL+ RS + + +P R + A+ KC S +V ++ TA S V C
Sbjct: 589 ASASSRPLLDRSG---STRSSPPRKVAIAAAKAGKCRSGIVTRLKPSSKITASSMSVTC 644
>09_04_0420 - 17416548-17416991
Length = 147
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 174 WWPQMAQNVLQMWSV 218
W P MA+NV++MWSV
Sbjct: 37 WDPAMAENVVKMWSV 51
>08_01_0821 + 7966587-7966832
Length = 81
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = +1
Query: 397 GACLEPRSIAKAPPGEGCPRCGGYVYAAEQMLARGRAW------HKECFKCGDCMKRL 552
GA E + ++ PG CPRCGG V A + +R +K+ F C C + L
Sbjct: 15 GAEEERETASRKAPG-ACPRCGGAVVATDVESSRRILCLPLCLRNKKKFSCSRCRRAL 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,109,751
Number of Sequences: 37544
Number of extensions: 392304
Number of successful extensions: 1328
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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