Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_H04
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   3.0  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   3.0  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   4.0  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   4.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   5.2  
AY994091-1|AAX86004.1|   83|Anopheles gambiae hyp6.3 precursor p...    23   9.1  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 136 CGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGEL 267
           C KS+Y A E  AG   +H +     +  ++L   N  +  GE+
Sbjct: 543 CDKSIYTAVEVTAGNRLFHHIVESDRVGTQILKEMNKQKLPGEV 586


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 526 KCGDCMKRLDSTNCCEGSDKDIYCKVC 606
           +C  C++R  +T  C G D+   C  C
Sbjct: 290 RCFRCLERGHTTADCAGEDRSSLCLHC 316


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 209 HLKHILCHLRPPATRSSAA*TDLPHFGHFGL 117
           HL      + P +  SS   TDLPH  H+ L
Sbjct: 477 HLSRHASSILPSSLVSSPDGTDLPHHTHYQL 507


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 209 HLKHILCHLRPPATRSSAA*TDLPHFGHFGL 117
           HL      + P +  SS   TDLPH  H+ L
Sbjct: 453 HLSRHASSILPSSLVSSPDGTDLPHHTHYQL 483


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 436  PGEGCPRCGGYVYAAEQMLARGRAWHK 516
            P   CPRC G V +   +L +   +H+
Sbjct: 946  PSAECPRCPGSVESVAHVLFQCEVFHE 972


>AY994091-1|AAX86004.1|   83|Anopheles gambiae hyp6.3 precursor
           protein.
          Length = 83

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = +3

Query: 147 SLRR*GARGWWPQMAQNVLQMWSV 218
           ++++ G RG+WP M ++V ++ ++
Sbjct: 53  AVQKMGGRGFWPIMMKSVKKIMAI 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,997
Number of Sequences: 2352
Number of extensions: 14570
Number of successful extensions: 45
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)