Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_H03
(734 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0985 - 22042801-22042963,22043019-22043138,22043261-220435... 144 5e-35
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665... 38 0.011
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 38 0.011
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 36 0.025
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380... 33 0.18
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 33 0.18
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943... 32 0.41
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 31 0.72
05_01_0290 + 2270749-2271037,2272227-2272363,2272660-2272805,227... 31 1.3
09_03_0087 - 12237226-12237346,12237423-12237555,12237641-122377... 30 1.7
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 29 2.9
10_01_0225 - 2395100-2395323,2395358-2395499 29 2.9
07_03_1316 + 25736931-25737206,25737276-25737329,25738036-257381... 29 2.9
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 2.9
03_05_0066 - 20455976-20456161,20456251-20456347,20456608-204567... 29 3.8
07_01_0688 - 5211484-5211626,5211730-5211826,5211930-5212105,521... 28 6.7
06_03_1176 - 28172230-28172547,28172691-28172849,28172962-28174194 28 6.7
05_05_0228 + 23454434-23455456,23456151-23456555,23456657-23457004 28 6.7
05_04_0383 - 20801036-20801309,20801413-20801538,20801706-208017... 28 6.7
02_05_0796 + 31800256-31800528,31800635-31800758,31802642-318027... 28 6.7
11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677 28 8.8
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 28 8.8
04_03_0053 - 10286076-10286516,10286560-10287586,10287756-102880... 28 8.8
>10_08_0985 -
22042801-22042963,22043019-22043138,22043261-22043562,
22044055-22044351,22044448-22044556,22044826-22045358,
22045446-22045644,22045741-22045865,22045937-22046020,
22046093-22046221,22046337-22046465,22046593-22046739,
22047106-22047346,22047859-22047980
Length = 899
Score = 144 bits (350), Expect = 5e-35
Identities = 76/173 (43%), Positives = 103/173 (59%), Gaps = 4/173 (2%)
Frame = +3
Query: 228 GYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNE--YYPTT-ENGLTTGYIFLEY 398
G+ NVVVVD P V PE+ EKL++VI KI+S+ G I + P E T GY F+EY
Sbjct: 58 GFANVVVVDNLPVVPPEKFEKLENVIRKIYSQIGAIKEGGLWMPVNPETKKTYGYCFIEY 117
Query: 399 SNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQWYL 578
+ PQ A A + TN KLDK H F VN+F DF KY +P EW P +P+ +LQ +L
Sbjct: 118 NTPQEAELAREKTNGYKLDKSHIFAVNMFDDFDKYMKVPDEWMPAEIKPYTPGENLQKWL 177
Query: 579 MDPDAYDQFLVGIGTGVALQVWQNALPE-PLLLQERPNWTETYAVWSPLXTYL 734
D A DQF++ GT + W +A + P L+ ++ WT+++ WSPL TYL
Sbjct: 178 ADEKARDQFVIRAGTFTEV-YWNDARQKMPELVFQKQYWTDSFIQWSPLGTYL 229
>08_02_0162 +
13464698-13464974,13465719-13465837,13465920-13466579,
13466686-13466763,13466849-13466938,13467241-13467378,
13467730-13467738
Length = 456
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/96 (21%), Positives = 43/96 (44%)
Frame = +3
Query: 303 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 482
+ +IF KFG I + +G + + F+ + NP +AA AV+ N K D + ++
Sbjct: 234 LKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRA 293
Query: 483 FTDFQKYSDIPKEWEPPAPQPFKVQSDLQWYLMDPD 590
++ ++ +++E + YL + D
Sbjct: 294 QKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLD 329
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 312 IFSKFGKIVNEYYPTTENG-LTTGYIFLEYSNPQNAAEAVKATN 440
+FS+ G +V+ N L+ GY ++ +S+P +AA A++ N
Sbjct: 58 VFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEMLN 101
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +3
Query: 315 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 473
FS FG I++ T +G + GY F+++ + A A+ N L+ + ++
Sbjct: 147 FSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYV 199
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 309 KIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLF 485
++FS FG I++ T NG + GY F+++ + +A +A+ N + Q F V LF
Sbjct: 167 EMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNGMLANGQKIF-VGLF 224
Score = 35.1 bits (77), Expect = 0.058
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +3
Query: 315 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDF 494
FS FG I + NGL+ + F+ + + A AVK N + ++
Sbjct: 260 FSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKS 319
Query: 495 QKYSDIPKEWEPPAPQPFKVQSDLQWYL--MDPDAYDQFL 608
++ +++ ++E Q F+ + YL +D D D+ L
Sbjct: 320 ERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHL 359
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 312 IFSKFGKIVNEYYPTTEN-GLTTGYIFLEYSNPQNAAEAVKATNNCKLD 455
+F FG++ N GL+ GY F++YS+P +AAEAV N +D
Sbjct: 323 LFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVD 371
Score = 35.9 bits (79), Expect = 0.033
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 309 KIFSKFGKIV-NEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 440
++F FG+IV + GL+ GY F++YS+P+ A+EA+K N
Sbjct: 227 ELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRMN 271
>10_08_0254 +
16236689-16236793,16237760-16237808,16237988-16238076,
16238178-16238234,16238684-16238746,16238828-16238893,
16239520-16239606,16239691-16239784,16240351-16240673,
16241022-16241048,16241065-16241145,16241445-16241476,
16242126-16242266,16242455-16242516,16243170-16243387
Length = 497
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 252 DGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAV 428
D VG + + ++ ++F + G +VN Y P L GY F+E+ + ++A A+
Sbjct: 24 DATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
Query: 429 KATNNCKL 452
K N KL
Sbjct: 84 KILNMIKL 91
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 303 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 473
++ FS FG I++ T E G + G+ F++Y + A A+K+ N ++ + ++
Sbjct: 143 LHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYV 199
>03_02_0555 +
9431451-9431688,9432685-9432803,9432886-9433079,
9433174-9433430,9433544-9433650,9433715-9433888,
9434359-9434490,9434776-9434955,9435062-9435265
Length = 534
Score = 32.3 bits (70), Expect = 0.41
Identities = 13/47 (27%), Positives = 29/47 (61%)
Frame = +3
Query: 303 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNN 443
+ ++F KFG I++ E+G + GY F++++ ++A +++ NN
Sbjct: 130 LQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLNN 176
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +3
Query: 210 KPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIF 389
K ++SDG+E+ ++ ++ ++ + + K G +V ++ +NGL G +
Sbjct: 52 KHEKSDGHEDYGLL---VSEKAKKYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAY 108
Query: 390 LEYSNPQNAAEAVKATNN 443
L+Y PQ+AA K +N
Sbjct: 109 LKYIRPQDAAWDAKEFDN 126
>05_01_0290 +
2270749-2271037,2272227-2272363,2272660-2272805,
2272853-2272877
Length = 198
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 285 EKLQSVINKIFSKFGKIVNEYYPTTEN-GLTTGYIFLEYSNPQNAAEAVKATNNCKL 452
E + ++ IF FG++ N + G GY +EY + A A+KA + +L
Sbjct: 111 EAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTEL 167
>09_03_0087 -
12237226-12237346,12237423-12237555,12237641-12237730,
12238992-12239198,12239738-12239813,12240019-12240148,
12241024-12241121
Length = 284
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 258 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTE 362
CP +GP ++K+ V+ + SK+G + + T +
Sbjct: 152 CPDIGPAEVQKMADVVKLLESKYGTKITPLFITID 186
>10_08_0747 - 20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 294 QSVINKIFSKFGKIVNE----YYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 440
+S I K+FS FGKI+ E + + G GY F++Y+ + A A + N
Sbjct: 882 ESDIIKMFSPFGKIIAEDFLWHTRGPKRGEPRGYAFVQYTTKEEAQLAKEKMN 934
>10_01_0225 - 2395100-2395323,2395358-2395499
Length = 121
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 717 VTRRHRF-RSSLVSPVTVEVQVMHSATPGEPHQSQCQQ 607
+ R+H + SSL SP VE V S GE Q QC Q
Sbjct: 15 IPRQHSWDSSSLASPWVVEYYVSDSDEGGEEEQGQCCQ 52
>07_03_1316 +
25736931-25737206,25737276-25737329,25738036-25738189,
25740235-25740313,25740413-25740492,25740588-25740654,
25741548-25741619,25742071-25742223,25742309-25742392,
25742811-25742877
Length = 361
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 303 INKIFSKFGKIVNEYYP-TTENGLTTGYIFLEYSNPQNAAEAV 428
++ +F K+G++V+ Y P G + G+ F+ Y A +AV
Sbjct: 168 LSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAV 210
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 312 IFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 455
+FS+FG+IV + G + GY F++YS+ A A+ A N L+
Sbjct: 326 LFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIAAMNGYHLE 374
>03_05_0066 -
20455976-20456161,20456251-20456347,20456608-20456738,
20456814-20456869,20457498-20457543
Length = 171
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 300 VINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 461
V+ + FS +G++V P G G F++YSN +A EA++ N +L Q
Sbjct: 48 VLKQAFSPYGELVYVKIPV---GKRCG--FVQYSNRASAEEAIRMLNGSQLGGQ 96
>07_01_0688 -
5211484-5211626,5211730-5211826,5211930-5212105,
5212240-5212631,5212712-5212960,5213046-5213188,
5213283-5213402,5214491-5214835
Length = 554
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 201 LEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVIN 308
L K KE+D N ++VDG +G +LE++++ I+
Sbjct: 208 LVPKDKEADVINNRLIVDGANGIGGLKLEEIKAKIS 243
>06_03_1176 - 28172230-28172547,28172691-28172849,28172962-28174194
Length = 569
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 331 LPNLLNILFITLCSFSRRSGPTCGH 257
LP+L N+ F+TLCS S R+ G+
Sbjct: 394 LPDLSNLTFLTLCSTSLRAVTVAGN 418
>05_05_0228 + 23454434-23455456,23456151-23456555,23456657-23457004
Length = 591
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 510 IPKEW-EPPAPQPFKVQSDLQWYLMDPDAYDQFLVGI 617
+P+E +PPA + S + W + PD +D + GI
Sbjct: 454 LPEETPQPPAEPIAAILSPILWQINSPDLFDMYSAGI 490
>05_04_0383 -
20801036-20801309,20801413-20801538,20801706-20801730,
20801808-20802259,20802330-20802394,20802487-20802711,
20804750-20804878,20805095-20805306,20806861-20806894
Length = 513
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 294 QSVINKIFSKFGKIVNEYYPTT-ENGLTTGYIFLEYSNPQNAAEAVK 431
+ V+ +I + G++V+ + P E + GY F EY + A AVK
Sbjct: 20 ERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETEEIAQYAVK 66
>02_05_0796 +
31800256-31800528,31800635-31800758,31802642-31802771,
31804336-31804414,31804848-31805133,31805273-31805385
Length = 334
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 315 FSKFGKIVNEYYPTT-ENGLTTGYIFLEYSNPQNAAEAVKATN 440
F ++G+I+ T E + GY F+ + P++A EAV+ N
Sbjct: 66 FQQYGEILEAVVITDRETSRSKGYGFVTFREPESAREAVRNPN 108
>11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677
Length = 174
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 303 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 455
I ++FS+ G + ++G + G + +S +A AVK NN +LD
Sbjct: 84 IKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVKRYNNVQLD 134
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 315 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 473
F FG I++ T +G + GY F++Y + A A+ N ++ + ++
Sbjct: 148 FCVFGNILSCKVATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYV 200
>04_03_0053 -
10286076-10286516,10286560-10287586,10287756-10288096,
10288198-10288248
Length = 619
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 609 VGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWS 716
+GI +AL + +A EPL+ WT++ WS
Sbjct: 104 IGISQALALTIVNSAKDEPLMAAATYFWTKSIGGWS 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,675,701
Number of Sequences: 37544
Number of extensions: 410184
Number of successful extensions: 1150
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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