Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_G19
         (842 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0618 + 30648672-30650108                                         31   1.1  
09_06_0061 + 20596360-20596618,20597039-20597158,20597329-205974...    30   2.0  
03_06_0397 - 33624883-33625484,33625569-33625632,33625663-336257...    29   3.5  
05_06_0155 - 26028923-26030263                                         29   4.6  
03_06_0363 - 33385641-33386201,33386421-33386894,33387013-33387429     29   6.1  
02_05_0248 + 27145459-27145551,27145824-27145952,27146030-271466...    28   8.1  

>01_06_0618 + 30648672-30650108
          Length = 478

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 6/130 (4%)
 Frame = +2

Query: 128 IYPYQGKSHFFVFRVYLRELAKRGHNVTIISHFPEQDPPANYHDISLAGTIKITEDNQSV 307
           +YP  G  H        +   K GH+VT++      +PP    D       ++   N SV
Sbjct: 7   LYPGGGVGHVVPMLELAKVFVKHGHDVTMVL----LEPPFKSSDSGALAVERLVASNPSV 62

Query: 308 RNSYWSVFSAAFYLAISGKENCQVMLANKQVQELIKS------KQKFDVVVVEQFNSDCA 469
                    A  + +        V+   +Q  E ++S      +Q+   +V++ F  D A
Sbjct: 63  SFHVLPPLPAPDFASFGKHPFLLVIQLLRQYNERLESFLLSIPRQRLHSLVIDMFCVD-A 121

Query: 470 LGVAYKLGAP 499
           + V  KLG P
Sbjct: 122 IDVCAKLGVP 131


>09_06_0061 +
           20596360-20596618,20597039-20597158,20597329-20597462,
           20597578-20597730,20597816-20597927,20598022-20598352,
           20598524-20598737,20598842-20598931,20599669-20599924,
           20600029-20600141,20600733-20600831,20600915-20600980,
           20601018-20601167,20601278-20601368,20601710-20601749,
           20603888-20605247,20605478-20605507,20605834-20605885,
           20606264-20606397,20606513-20606665,20607089-20607202
          Length = 1356

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 243 GGSCSGK-CEIIVTLWPRLANSRK*TLNTKKWLFPWYGYIP 124
           G S  G  C I  +LWP LA S    LNT   + P Y +IP
Sbjct: 552 GNSIGGYICSITASLWPSLARSLI-LLNTAGSVVPSYSFIP 591


>03_06_0397 -
           33624883-33625484,33625569-33625632,33625663-33625744,
           33626081-33626649
          Length = 438

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 23/93 (24%), Positives = 38/93 (40%)
 Frame = +2

Query: 278 IKITEDNQSVRNSYWSVFSAAFYLAISGKENCQVMLANKQVQELIKSKQKFDVVVVEQFN 457
           I +T   QSV   YWS F+   +L       C     N    E++  K +  +   ++  
Sbjct: 296 ILLTVIPQSV--DYWSAFAVTLFLMGITISWCATCANNPMFAEVVPPKHRTMIYAFDRAF 353

Query: 458 SDCALGVAYKLGAPAIGMSSHTLMPYHYKRLGI 556
                G    L APA+GM +  +  Y+ K + +
Sbjct: 354 E----GSFASLAAPAVGMVTEKIYGYNAKTVNL 382


>05_06_0155 - 26028923-26030263
          Length = 446

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
 Frame = +2

Query: 389 NKQVQELIKSKQKFDVVVVEQFNSDCALGVAYKLGAPA----IGMSSHTLMPYHYKRLGI 556
           N  ++E ++S       VV      CAL VA +LG PA     G +SH  +  H     +
Sbjct: 65  NAPLREYLRSSVPSARAVVFDMFCACALDVAAELGLPAYFFQCGGASHLAVGLH-----L 119

Query: 557 PYNPSYVPFHFLEGGTKPSLFHRV 628
           P+  + +   F E G +P LF  V
Sbjct: 120 PHVQAEINASFGEIGDEPLLFPSV 143


>03_06_0363 - 33385641-33386201,33386421-33386894,33387013-33387429
          Length = 483

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 110 GLNILGIYPYQGKSHFFVFRVYLRELAKRGHNVTIIS 220
           GL+++ ++P+    H   +    + LA RGH+VT +S
Sbjct: 8   GLDVV-VFPWLAFGHMIPYLELSKRLAARGHDVTFVS 43


>02_05_0248 +
           27145459-27145551,27145824-27145952,27146030-27146695,
           27147170-27147756,27147882-27148225,27148808-27148815
          Length = 608

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 242 PANYHDISLAGTIKITEDNQSVRNSYWSVF 331
           PA + DISLAG +K T  ++S  NS+++ F
Sbjct: 313 PAYFMDISLAGILKTTSRSESA-NSFFNRF 341


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,218,134
Number of Sequences: 37544
Number of extensions: 413825
Number of successful extensions: 876
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)