Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_G17
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81481-7|CAB63437.3|  511|Caenorhabditis elegans Hypothetical pr...    29   5.2  
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ...    28   6.9  
AC024882-17|AAF60937.1|  321|Caenorhabditis elegans Serpentine r...    28   9.1  

>Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical
           protein C49F8.1 protein.
          Length = 407

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 651 NHEFDDGPEGLAPYLSALNAPVVAANLDVSKEPSLQNL 764
           +H +  GP+   P LS   +P  AA   V ++P+L NL
Sbjct: 261 HHGYVYGPQQAMPQLSQYPSPSTAAPAPVPEQPTLNNL 298


>Z81481-7|CAB63437.3|  511|Caenorhabditis elegans Hypothetical
           protein C38D9.6 protein.
          Length = 511

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 202 KSNEYVTCFKTIGFNIREYLNPGYKKIVEEQLFLNTVYDIIRN 74
           KS  Y  C+ TI   +++ +    +KI  E      VYD++RN
Sbjct: 333 KSEHYHNCYTTITTVVKKAICLFVEKITLEGFQFKEVYDVLRN 375


>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
           protein Y54E10A.11 protein.
          Length = 1446

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 604 VTFHLSSVYQKVPWKLSPAFRSIECGFSTSSVWMWW*SLGN 482
           +T  ++S    +PW+   +  +I C F T S ++ W  LGN
Sbjct: 368 ITSIITSFTDNLPWQAEASMNAIHCWFCTFSDFVKW-ILGN 407


>AC024882-17|AAF60937.1|  321|Caenorhabditis elegans Serpentine
           receptor, class z protein28 protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 300 KMYLIIVKVSLFLGNVYSFVLPFEGLYRLDV 392
           K  L+  KV+L + + Y F+L F+ L+ LDV
Sbjct: 222 KYILLQTKVTLLMKSTYIFILLFQFLHDLDV 252


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,637,911
Number of Sequences: 27780
Number of extensions: 402784
Number of successful extensions: 874
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)