Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_G15
(794 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 74 2e-14
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 29 0.58
SPBC2G5.06c |hmt2|cad1|sulfide-quinone oxidoreductase|Schizosacc... 29 1.0
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 28 1.3
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 28 1.8
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 2.3
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 27 3.1
SPBC887.18c |||transcription adaptor protein |Schizosaccharomyce... 26 7.1
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 26 7.1
SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr 3||... 25 9.4
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 25 9.4
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 74.1 bits (174), Expect = 2e-14
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 6/160 (3%)
Frame = +3
Query: 186 LPVFSS-MYNDLRTNTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKHFDLLSHIQL 362
LPV+ S +Y DL+TNTP + M Y D F T +P +Y + + + LL I+L
Sbjct: 77 LPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQ--PLLPFIKL 134
Query: 363 RSLVTSVKWAGNHWNLTYTKTDTKENVT-ETCDFIVVANGPYNTPVWPKYDGIETF---- 527
+ V ++ W +TY T ++ + D + + NG Y P P G++ +
Sbjct: 135 ATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAV 194
Query: 528 EGNMIHSHDYKDRKAYKNRKVLIVGAGASGLDLAIQLSNV 647
G+++HS +++ + + VL+VG +S DL L+ V
Sbjct: 195 PGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPV 234
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 29.5 bits (63), Expect = 0.58
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 444 TETCDFIVVANGPYNTPVWPKYDGIETFEGNMIHSHDYKDRKAYK-NRKVLIVGAGASGL 620
T +C+ I+ G V+ +Y + +G + D + RK V + G +
Sbjct: 34 TTSCN-IIKKEGANIISVYARYPVVAA-KGEGSYLFDKEGRKYIDFTSGVAVTSLGHAHP 91
Query: 621 DLAIQLSNVTAKLVHSHHLVYNEP 692
++A ++ +KLVHS +L YNEP
Sbjct: 92 EVARLAADQCSKLVHSSNLFYNEP 115
>SPBC2G5.06c |hmt2|cad1|sulfide-quinone
oxidoreductase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 28.7 bits (61), Expect = 1.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 564 RKAYKNRKVLIVGAGASGLDLAIQLSNVTAK 656
R A + KVL+VG G++G+ +A Q+ N +K
Sbjct: 23 RFASTHHKVLVVGGGSAGISVAHQIYNKFSK 53
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +2
Query: 224 EYATSNHGILRLSISRGNPVVSIGNVLPRLLKIICEAFRFTQSYSIAQLGHISEVGGQSL 403
E + + LRLS S ++ N + +I R T +Y I +GH + +
Sbjct: 227 EQMPTGNRFLRLSWSPDGAHIASVNAVNEGAYVIAIVQRDTWTYDINLVGHQGPLECATF 286
Query: 404 EPYLHKDGHQ 433
PYL++D Q
Sbjct: 287 NPYLYEDPFQ 296
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 363 RSLVTSVKWAGNHWNLTYTKTDTKENVTETCDFIVVANGPYNTPVWPKYDGIETF 527
R LV + N W+ ++ + +EN + + +A G +T V P+Y I TF
Sbjct: 303 RHLVEFYESIKNFWSQSFLLSP-EENSLDDVLLVSIAGGGLDTHVVPEYSSISTF 356
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 573 YKNRKVLIVGAGASGLDLAIQLSNVTAKLVH 665
+K+ KVL+VGAG G +L L K VH
Sbjct: 23 FKSAKVLLVGAGGIGCELLKNLLMSGVKEVH 53
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 297 TCFLDYLKSFVKHFDLLSHIQLRSLVTSVKWAGNHWNLTYTKTDTKEN 440
T D + FV+H+ +L +L+ KW N N T +T ++N
Sbjct: 606 TIIADEVVKFVEHYSSTFDQELLNLINDEKWQ-NFVNKTLVETRNRDN 652
>SPBC887.18c |||transcription adaptor protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 339
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = -1
Query: 788 IIQFLK*FXSENNTFRSKRHYXWFXHVTIEKFRFVIHQVVAVN 660
I LK N+TF + H WF ++ F+ ++ + N
Sbjct: 80 IFHILKLMQKNNDTFSALHHLPWFKRKKVDNSLFLHKKISSQN 122
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 605 SSYYKHLSVFVRLPIFVIMTVDHVAFKCFYSVVLGPHRS 489
SS YK+ + P+F+++ YS +LGP S
Sbjct: 2 SSEYKYDEQGIFFPVFLLVGTSCCVLPLTYSTILGPSAS 40
>SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 454
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -1
Query: 488 IIRAICYHNEVARLSYIFLGVRLCVSKVPVIARPL 384
I+ +CY + L+YIF V + + + +A P+
Sbjct: 407 IVVYVCYSESIKALAYIFPKVTIVTAFLESVAEPV 441
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +3
Query: 438 NVTETCDFIV--VANGPYNTPVWPKYDGIETFEGN-----MIHSHDYKDRKA 572
N E +F+V VAN N P +PK+ I+ + G+ + S+D KD ++
Sbjct: 519 NNKEWVNFLVRDVANPSSNDPYFPKHRMIDIYHGHGWASGLFESNDGKDEES 570
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,366,149
Number of Sequences: 5004
Number of extensions: 72950
Number of successful extensions: 213
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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