Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_G11
         (699 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071329-1|AAL48951.1|  210|Drosophila melanogaster RE34924p pro...   374   e-104
AE013599-1201|AAF58728.1|  210|Drosophila melanogaster CG11979-P...   374   e-104

>AY071329-1|AAL48951.1|  210|Drosophila melanogaster RE34924p
           protein.
          Length = 210

 Score =  374 bits (920), Expect = e-104
 Identities = 178/194 (91%), Positives = 185/194 (95%)
 Frame = +3

Query: 117 MDAAAXTYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIV 296
           MD  A TYKLWRIRKT+MQL HDRGYLVTQDELDQTLEQFKE FGDKPSEKRPARSDLIV
Sbjct: 1   MDDEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIV 60

Query: 297 LVAHNDDPTDQMFVFFPDEAKIGIKTIKTYCTRMQEENIHRAIVVVQAGMSPSAKQSLVD 476
           LVAHNDDPTDQMFVFFP+E KIGIKTIKTYCTRMQEENIHRAIVVVQ GM+PSAKQSLVD
Sbjct: 61  LVAHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVD 120

Query: 477 MAPKYILEQFLESELLINITEHELVPEHIVLTPDEKQELLARYKLKENMLMRIQAGDPVA 656
           MAPKYILEQFLESELLINITEHELVPEH+V+T +EKQELL+RYKLKENMLMRIQAGDPVA
Sbjct: 121 MAPKYILEQFLESELLINITEHELVPEHVVMTVEEKQELLSRYKLKENMLMRIQAGDPVA 180

Query: 657 RYFGLKRGQVVXII 698
           RYFGLKRGQVV II
Sbjct: 181 RYFGLKRGQVVKII 194


>AE013599-1201|AAF58728.1|  210|Drosophila melanogaster CG11979-PA
           protein.
          Length = 210

 Score =  374 bits (920), Expect = e-104
 Identities = 178/194 (91%), Positives = 185/194 (95%)
 Frame = +3

Query: 117 MDAAAXTYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIV 296
           MD  A TYKLWRIRKT+MQL HDRGYLVTQDELDQTLEQFKE FGDKPSEKRPARSDLIV
Sbjct: 1   MDDEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIV 60

Query: 297 LVAHNDDPTDQMFVFFPDEAKIGIKTIKTYCTRMQEENIHRAIVVVQAGMSPSAKQSLVD 476
           LVAHNDDPTDQMFVFFP+E KIGIKTIKTYCTRMQEENIHRAIVVVQ GM+PSAKQSLVD
Sbjct: 61  LVAHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVD 120

Query: 477 MAPKYILEQFLESELLINITEHELVPEHIVLTPDEKQELLARYKLKENMLMRIQAGDPVA 656
           MAPKYILEQFLESELLINITEHELVPEH+V+T +EKQELL+RYKLKENMLMRIQAGDPVA
Sbjct: 121 MAPKYILEQFLESELLINITEHELVPEHVVMTVEEKQELLSRYKLKENMLMRIQAGDPVA 180

Query: 657 RYFGLKRGQVVXII 698
           RYFGLKRGQVV II
Sbjct: 181 RYFGLKRGQVVKII 194


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,233,646
Number of Sequences: 53049
Number of extensions: 665074
Number of successful extensions: 1658
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1658
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)