Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_G09
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.64 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.0  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 281 KDSEVYKLIGPVLVKQDLEEARQNVSKRME 370
           K +++ K +GP + + DL  A QN+ K  E
Sbjct: 268 KFTDLQKAVGPEITRTDLVPAFQNLLKDTE 297


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +1

Query: 88   LFIFYQIIP*LKHNGGXNTKKVSKTARIISRCSKRHKESGHSETTIRQPVK 240
            L +  Q    + H  G  ++ ++KT      CSK   E    E   R P+K
Sbjct: 1293 LLMVIQFFAMMIHRFGTFSQIITKTQLDFDLCSKPIDEMTVDELRSRDPIK 1343


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +1

Query: 88   LFIFYQIIP*LKHNGGXNTKKVSKTARIISRCSKRHKESGHSETTIRQPVK 240
            L +  Q    + H  G  ++ ++KT      CSK   E    E   R P+K
Sbjct: 1293 LLMVIQFFAMMIHRFGTFSQIITKTQLDFDLCSKPIDEMTVDELRSRDPIK 1343


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 491 LLVLVCQDHF*VYLSFL 441
           LL L+C D+F ++L FL
Sbjct: 193 LLFLLCLDYFTLHLLFL 209


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = -3

Query: 524 NILLLIHTFFKLLVLVCQDHF*----VYLSFLAVLLVCFLKHIC 405
           + L++    F + VLV  +       VY+SFL ++    + +IC
Sbjct: 251 SFLIITQVIFVICVLVQSEKIVWLHLVYISFLGIICAADVFYIC 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,257
Number of Sequences: 336
Number of extensions: 1659
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)