Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_G07
         (733 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK023964-1|BAB14742.1|  184|Homo sapiens protein ( Homo sapiens ...   100   1e-20
BC014298-1|AAH14298.1|  184|Homo sapiens PRKR interacting protei...    96   1e-19
BC069020-1|AAH69020.1|  480|Homo sapiens IGHG1 protein protein.        32   1.8  
EF585496-1|ABQ40006.1|  173|Homo sapiens TNFAIP3-interacting pro...    30   7.4  
AK024815-1|BAB15018.1|  256|Homo sapiens protein ( Homo sapiens ...    30   7.4  
AJ320534-1|CAC85929.1|  319|Homo sapiens ABIN-3 protein protein.       30   7.4  
AF277289-1|AAL02151.1|  325|Homo sapiens putative Listeria-induc...    30   7.4  
X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.      30   9.8  
BC128408-1|AAI28409.1|  325|Homo sapiens TNFAIP3 interacting pro...    30   9.8  

>AK023964-1|BAB14742.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13902 fis, clone THYRO1001793. ).
          Length = 184

 Score = 99.5 bits (237), Expect = 1e-20
 Identities = 50/98 (51%), Positives = 64/98 (65%)
 Frame = +2

Query: 131 EEKKPVLIKNATDLQRLKLEKLMKNXXXXXXXXXXXXXXXXXXXXXFVRNVMGSSAGAGS 310
           E +  V+ KNA + Q+LKLE+LMKN                     FVR+VMGSSAGAGS
Sbjct: 17  EPQTLVIPKNAAEEQKLKLERLMKNPDKAVPIPEKMSEWAPRPPPEFVRDVMGSSAGAGS 76

Query: 311 GEFHVYRHLRRKEYARQRFIQEKSEKEKLDEEYHKKIE 424
           GEFHVYRHLRR+EY RQ ++   +EK+KLD E+ K++E
Sbjct: 77  GEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLE 114


>BC014298-1|AAH14298.1|  184|Homo sapiens PRKR interacting protein 1
           (IL11 inducible) protein.
          Length = 184

 Score = 95.9 bits (228), Expect = 1e-19
 Identities = 49/98 (50%), Positives = 63/98 (64%)
 Frame = +2

Query: 131 EEKKPVLIKNATDLQRLKLEKLMKNXXXXXXXXXXXXXXXXXXXXXFVRNVMGSSAGAGS 310
           E +  V+ KNA + Q+LKLE+LMKN                     FVR+VMGSSAGAGS
Sbjct: 17  EPQTLVIPKNAAEEQKLKLERLMKNPDKAVPIPEKMSEWAPRPPPEFVRDVMGSSAGAGS 76

Query: 311 GEFHVYRHLRRKEYARQRFIQEKSEKEKLDEEYHKKIE 424
           GEFHVYRHLRR+EY RQ ++   +EK+KL  E+ K++E
Sbjct: 77  GEFHVYRHLRRREYQRQDYMDAMAEKQKLYAEFQKRLE 114


>BC069020-1|AAH69020.1|  480|Homo sapiens IGHG1 protein protein.
          Length = 480

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -3

Query: 704 PHCFFVQCSQTYFYYYVQI 648
           PH FFV  ++TYFYYY+ +
Sbjct: 121 PHYFFVVPAETYFYYYMDV 139


>EF585496-1|ABQ40006.1|  173|Homo sapiens TNFAIP3-interacting
           protein 3 beta protein.
          Length = 173

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 338 RRKEYARQRFIQEKSEKEKLDEEYHKKIED 427
           R+++  R R  +E+ EKE+L+EE H+  E+
Sbjct: 108 RQRDLTRDRLQREEKEKERLNEELHELKEE 137


>AK024815-1|BAB15018.1|  256|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21162 fis, clone CAS10059. ).
          Length = 256

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 338 RRKEYARQRFIQEKSEKEKLDEEYHKKIED 427
           R+++  R R  +E+ EKE+L+EE H+  E+
Sbjct: 45  RQRDLTRDRLQREEKEKERLNEELHELKEE 74


>AJ320534-1|CAC85929.1|  319|Homo sapiens ABIN-3 protein protein.
          Length = 319

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 338 RRKEYARQRFIQEKSEKEKLDEEYHKKIED 427
           R+++  R R  +E+ EKE+L+EE H+  E+
Sbjct: 108 RQRDLTRDRLQREEKEKERLNEELHELKEE 137


>AF277289-1|AAL02151.1|  325|Homo sapiens putative Listeria-induced
           protein LIND protein.
          Length = 325

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 338 RRKEYARQRFIQEKSEKEKLDEEYHKKIED 427
           R+++  R R  +E+ EKE+L+EE H+  E+
Sbjct: 108 RQRDLTRDRLQREEKEKERLNEELHELKEE 137


>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
          Length = 1411

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 302 AGSGEFHVYRHLRRKEYARQRFIQEKSEKEKLDEEYHKKIED 427
           AG GE  V   L+ K +  Q  + + +EK K   E HK+ ++
Sbjct: 555 AGEGETAVLNQLQEKNHTLQEQVTQLTEKLKNQSESHKQAQE 596


>BC128408-1|AAI28409.1|  325|Homo sapiens TNFAIP3 interacting
           protein 3 protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 338 RRKEYARQRFIQEKSEKEKLDEEYHKKIED 427
           R ++  R R  +E+ EKE+L+EE H+  E+
Sbjct: 108 RHRDLTRDRLQREEKEKERLNEELHELKEE 137


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,610,595
Number of Sequences: 237096
Number of extensions: 1187617
Number of successful extensions: 3466
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3464
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)