Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_G07
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00032-11|AAA50630.1| 189|Caenorhabditis elegans Hypothetical p... 71 8e-13
U97017-3|AAB52360.1| 199|Caenorhabditis elegans Hypothetical pr... 29 2.6
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 28 5.9
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 5.9
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 5.9
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical p... 28 7.8
>U00032-11|AAA50630.1| 189|Caenorhabditis elegans Hypothetical
protein F37A4.2 protein.
Length = 189
Score = 70.9 bits (166), Expect = 8e-13
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +2
Query: 125 SDEEKKPVLIKNATDLQRLKLEKLMKNXXXXXXXXXXXXXXXXXXXXX-FVRNVMGSSAG 301
++EE++ +ATDL R++L +L +N FVRNV+GSSA
Sbjct: 8 TEEERRA---NSATDLIRMRLARLQQNIDKPAPIPIKKETLRAPKEPLEFVRNVVGSSAA 64
Query: 302 AGSGEFHVYRHLRRKEYARQRFIQEKSEKEKLDEEYHKKIE 424
AGS EFH+YR+ RRKE R +I ++KE+LD+ Y K+E
Sbjct: 65 AGSAEFHIYRNNRRKEQNRLDYIDAVAKKEELDDAYRHKVE 105
>U97017-3|AAB52360.1| 199|Caenorhabditis elegans Hypothetical
protein F47B3.5 protein.
Length = 199
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 617 KQKNEDIGSSKFEHNSRNKSENIEQKSSED 706
K+K+++ GS K E + KS+ E K SED
Sbjct: 17 KEKSKNEGSKKEESKDKEKSKKSEDKKSED 46
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 617 KQKNEDIGSSKFEHNSRNKSENIEQKSSED 706
K+K+++ GS K E + KS+ E K SED
Sbjct: 99 KEKSKNEGSKKEESKDKEKSKKSEDKKSED 128
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 468 QRD*RKSEMQKLKRKETKQKTRKLLH 545
+RD RK E +K+++K K+K +K H
Sbjct: 828 ERDERKKEKEKVRKKAEKEKLKKKKH 853
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 468 QRD*RKSEMQKLKRKETKQKTRKLLH 545
+RD RK E +K+++K K+K +K H
Sbjct: 1119 ERDERKKEKEKVRKKAEKEKLKKKKH 1144
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 468 QRD*RKSEMQKLKRKETKQKTRKLLH 545
+RD RK E +K+++K K+K +K H
Sbjct: 1134 ERDERKKEKEKVRKKAEKEKLKKKKH 1159
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 468 QRD*RKSEMQKLKRKETKQKTRKLLH 545
+RD RK E +K+++K K+K +K H
Sbjct: 1134 ERDERKKEKEKVRKKAEKEKLKKKKH 1159
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 468 QRD*RKSEMQKLKRKETKQKTRKLLH 545
+RD RK E +K+++K K+K +K H
Sbjct: 828 ERDERKKEKEKVRKKAEKEKLKKKKH 853
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 468 QRD*RKSEMQKLKRKETKQKTRKLLH 545
+RD RK E +K+++K K+K +K H
Sbjct: 1119 ERDERKKEKEKVRKKAEKEKLKKKKH 1144
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 468 QRD*RKSEMQKLKRKETKQKTRKLLH 545
+RD RK E +K+++K K+K +K H
Sbjct: 1134 ERDERKKEKEKVRKKAEKEKLKKKKH 1159
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 468 QRD*RKSEMQKLKRKETKQKTRKLLH 545
+RD RK E +K+++K K+K +K H
Sbjct: 1134 ERDERKKEKEKVRKKAEKEKLKKKKH 1159
>Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical
protein Y49E10.19 protein.
Length = 1159
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 269 FVRNVMGSSAGAGSGEFHVYRH--LRRKEYAR--QRFIQEKSEKEKLDEEYHKKIED 427
F+ N G G+G+G YR L+R E R I+E++E E E Y + E+
Sbjct: 624 FIDNAFGFMEGSGAGTPSPYREPPLQRLEKNRPPAEVIEEETENEDESEPYEPEEEE 680
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,329,092
Number of Sequences: 27780
Number of extensions: 201368
Number of successful extensions: 922
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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