Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_G03
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.7  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   5.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   6.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   6.9  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   9.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.1  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +2

Query: 491 VEDDQHRLQWEFYSKEINFTEGSGKLEKSD 580
           +  + HR++WE   KE+  T G+ +L +++
Sbjct: 83  LNSEAHRIRWESVQKEVTVT-GTYQLTETE 111


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 606 VYHIHLGLKSGCIYVELTR 662
           +YH+++GL SG I +   R
Sbjct: 126 IYHLYMGLLSGGIILRKKR 144


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 128 YKMSMNYSIETKPRLSLDYFIYKFYFLSN 42
           Y +  NY+I  +  + +   I  +YF SN
Sbjct: 370 YFLDYNYTIPKEKHVEVARLIRNYYFESN 398


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 128 YKMSMNYSIETKPRLSLDYFIYKFYFLSN 42
           Y +  NY+I  +  + +   I  +YF SN
Sbjct: 370 YFLDYNYTIPKEKHVEVARLIRNYYFESN 398


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 561 VSLKNQINYRKWSKMVYHIHLGLKSGCIYVELTR 662
           +SLKN++        ++ I+LG++ G    +L R
Sbjct: 448 LSLKNKVETTHSGTSLFRINLGIECGYEIKKLLR 481


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 135 SKWILPNRYSVQEIMLGMSVVKTTN 209
           +KW  PNR  VQ  + G  +V  +N
Sbjct: 840 TKWGNPNRPIVQSGIFGKYMVSPSN 864


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,895
Number of Sequences: 438
Number of extensions: 3581
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)