Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_G02
(745 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52846-1|CAA37037.1| 575|Drosophila melanogaster protein ( Dros... 29 5.1
BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p pro... 29 8.8
BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p pro... 29 8.8
BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p pro... 29 8.8
AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF... 29 8.8
AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC... 29 8.8
AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB... 29 8.8
AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE... 29 8.8
AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD... 29 8.8
AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA... 29 8.8
>X52846-1|CAA37037.1| 575|Drosophila melanogaster protein (
Drosophila melanogasterRM62 mRNA for novel RNA helicase.
).
Length = 575
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 729 GGSDGRVAQSRGSRVAYGGGSTVFHSGCNGGVAQSRGSR 613
GG D R G+R GGG +H NG V + R R
Sbjct: 21 GGDDRRGGGGGGNRFGGGGGGGDYHGIRNGAVEKRRDDR 59
>BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p
protein.
Length = 575
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 729 GGSDGRVAQSRGSRVAYGGGSTVFHSGCNGGVAQSRGSR 613
GG D R G+R GGG +H NG V + R R
Sbjct: 21 GGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 59
>BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p
protein.
Length = 719
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 729 GGSDGRVAQSRGSRVAYGGGSTVFHSGCNGGVAQSRGSR 613
GG D R G+R GGG +H NG V + R R
Sbjct: 165 GGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 203
>BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p
protein.
Length = 578
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 729 GGSDGRVAQSRGSRVAYGGGSTVFHSGCNGGVAQSRGSR 613
GG D R G+R GGG +H NG V + R R
Sbjct: 24 GGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 62
>AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF,
isoform F protein.
Length = 578
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 729 GGSDGRVAQSRGSRVAYGGGSTVFHSGCNGGVAQSRGSR 613
GG D R G+R GGG +H NG V + R R
Sbjct: 24 GGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 62
>AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC,
isoform C protein.
Length = 578
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 729 GGSDGRVAQSRGSRVAYGGGSTVFHSGCNGGVAQSRGSR 613
GG D R G+R GGG +H NG V + R R
Sbjct: 24 GGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 62
>AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB,
isoform B protein.
Length = 578
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 729 GGSDGRVAQSRGSRVAYGGGSTVFHSGCNGGVAQSRGSR 613
GG D R G+R GGG +H NG V + R R
Sbjct: 24 GGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 62
>AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE,
isoform E protein.
Length = 578
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 729 GGSDGRVAQSRGSRVAYGGGSTVFHSGCNGGVAQSRGSR 613
GG D R G+R GGG +H NG V + R R
Sbjct: 24 GGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 62
>AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD,
isoform D protein.
Length = 575
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 729 GGSDGRVAQSRGSRVAYGGGSTVFHSGCNGGVAQSRGSR 613
GG D R G+R GGG +H NG V + R R
Sbjct: 21 GGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 59
>AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA,
isoform A protein.
Length = 719
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 729 GGSDGRVAQSRGSRVAYGGGSTVFHSGCNGGVAQSRGSR 613
GG D R G+R GGG +H NG V + R R
Sbjct: 165 GGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 203
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,249,247
Number of Sequences: 53049
Number of extensions: 169160
Number of successful extensions: 752
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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