Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_F19
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.97 
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.97 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.97 
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.97 
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.97 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.1  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 293 KPFSNEGKPLVVQFTVKHEQDID 361
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 293 KPFSNEGKPLVVQFTVKHEQDID 361
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 293 KPFSNEGKPLVVQFTVKHEQDID 361
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 293 KPFSNEGKPLVVQFTVKHEQDID 361
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 293 KPFSNEGKPLVVQFTVKHEQDID 361
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/17 (64%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
 Frame = +1

Query: 34  SCASKMQAVVLGR-CQL 81
           +CA+K Q+VVLGR C L
Sbjct: 565 NCATKAQSVVLGRICTL 581


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +2

Query: 185 FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 286
           FGK   T   FFSD + D  +    D   Y L R
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISD-NLYILCR 235


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +2

Query: 185 FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 286
           FGK   T   FFSD + D  +    D   Y L R
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISD-NLYILCR 235


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 375 YPPPQSMSCSCLTVNWTTKGLP 310
           YPPP S+    ++V   T G P
Sbjct: 213 YPPPGSLGSMGVSVPCGTSGNP 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,649
Number of Sequences: 336
Number of extensions: 3945
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)