Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_F18
         (368 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1; ...    35   0.41 
UniRef50_UPI0000D56263 Cluster: PREDICTED: similar to CG11321-PA...    35   0.54 
UniRef50_A0L6C2 Cluster: Putative uncharacterized protein; n=1; ...    33   2.2  
UniRef50_UPI00015B4C86 Cluster: PREDICTED: hypothetical protein;...    32   2.9  
UniRef50_UPI00003ACDA3 Cluster: UPI00003ACDA3 related cluster; n...    32   2.9  
UniRef50_UPI000023E6D1 Cluster: hypothetical protein FG03263.1; ...    31   5.1  

>UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 1411

 Score = 35.1 bits (77), Expect = 0.41
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +1

Query: 49  RYRPTCCTRCSSCFWST-PC--SRRMVCPGTR*VEHNCRRTSRRH 174
           + RP  CTRC  CF+ T  C  S R +  G+   EHNCRR    H
Sbjct: 367 KQRPLQCTRCY-CFYDTRACRSSERCISCGSSKQEHNCRRGGAVH 410


>UniRef50_UPI0000D56263 Cluster: PREDICTED: similar to CG11321-PA,
            isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
            similar to CG11321-PA, isoform A - Tribolium castaneum
          Length = 2084

 Score = 34.7 bits (76), Expect = 0.54
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 67   CTRCSSCFWSTPCSRRMVCPGTR*VE-HNCRR 159
            C +CSS F + P  RR+VCP  + V   NCRR
Sbjct: 1787 CVKCSSGFIANPRQRRLVCPDCKSVTCANCRR 1818


>UniRef50_A0L6C2 Cluster: Putative uncharacterized protein; n=1;
           Magnetococcus sp. MC-1|Rep: Putative uncharacterized
           protein - Magnetococcus sp. (strain MC-1)
          Length = 523

 Score = 32.7 bits (71), Expect = 2.2
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = -1

Query: 143 STHLVPGQTILLEQGVLQKQELQRVQQVGRYLQPMKPLAPVF 18
           S+H V     L+E G+ Q + L+RV Q GR++Q + PLA  F
Sbjct: 431 SSHEVALDLSLMEYGIYQ-EALERVLQSGRFVQQVAPLAERF 471


>UniRef50_UPI00015B4C86 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 683

 Score = 32.3 bits (70), Expect = 2.9
 Identities = 20/76 (26%), Positives = 30/76 (39%)
 Frame = -1

Query: 251 CNIINQCRVFMQHSSLERIHPTXXXXXXXXXXXXLCSTHLVPGQTILLEQGVLQKQELQR 72
           CN + Q     Q S +E+                     L   QT+L   G  Q+Q++Q+
Sbjct: 379 CNTL-QTTTIQQRSDMEKERRNFHLYFSYDSRCNETQIELTSTQTVLNADGSQQQQQIQQ 437

Query: 71  VQQVGRYLQPMKPLAP 24
           +QQ  R    +KP  P
Sbjct: 438 IQQFDRPPLELKPSTP 453


>UniRef50_UPI00003ACDA3 Cluster: UPI00003ACDA3 related cluster; n=1;
           Gallus gallus|Rep: UPI00003ACDA3 UniRef100 entry -
           Gallus gallus
          Length = 89

 Score = 32.3 bits (70), Expect = 2.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 55  RPTCCTRCSSCFWSTPCSRRMVCP 126
           +P CCT  ++C W TPC +    P
Sbjct: 60  QPLCCTEAATCSWITPCVKVQESP 83


>UniRef50_UPI000023E6D1 Cluster: hypothetical protein FG03263.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG03263.1 - Gibberella zeae PH-1
          Length = 518

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 94  STPCSRRMVCPGTR*VE-HNCRRTSRRHRSALVGWIRSRLECC 219
           S PCSRR  C  T  V  H C++   RHR    G+ R   + C
Sbjct: 435 SVPCSRRGACRRTTCVHGHVCQKADCRHRIGGKGYCRFPSKVC 477


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,761,685
Number of Sequences: 1657284
Number of extensions: 2680182
Number of successful extensions: 6619
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6610
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)