Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_F18
         (368 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p pro...    30   1.1  
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r...    30   1.1  
AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,...    30   1.1  
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,...    30   1.1  
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,...    30   1.1  
AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-P...    29   1.4  
AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-P...    29   1.4  

>AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p
           protein.
          Length = 1022

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -1

Query: 134 LVPGQTILLEQGVLQKQELQRVQQ 63
           L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 695 LSPGQTIVTQRNVPQSQALQMVQQ 718


>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
            remodeling factor largesubunit NURF301 protein.
          Length = 2669

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -1

Query: 134  LVPGQTILLEQGVLQKQELQRVQQ 63
            L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 1832 LSPGQTIVTQRNVPQSQALQMVQQ 1855


>AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,
            isoform C protein.
          Length = 2159

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -1

Query: 134  LVPGQTILLEQGVLQKQELQRVQQ 63
            L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 1832 LSPGQTIVTQRNVPQSQALQMVQQ 1855


>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
            isoform A protein.
          Length = 2669

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -1

Query: 134  LVPGQTILLEQGVLQKQELQRVQQ 63
            L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 1832 LSPGQTIVTQRNVPQSQALQMVQQ 1855


>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
            isoform B protein.
          Length = 2649

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -1

Query: 134  LVPGQTILLEQGVLQKQELQRVQQ 63
            L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 1812 LSPGQTIVTQRNVPQSQALQMVQQ 1835


>AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-PB,
            isoform B protein.
          Length = 2922

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 67   CTRCSSCFWSTPCSRRMVCPGTR*VE-HNCRRT-SRRHRSA 183
            C +CSS F++ P  +R++CP    V    CR+   R+H  +
Sbjct: 2627 CIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGS 2667


>AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-PA,
            isoform A protein.
          Length = 2594

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 67   CTRCSSCFWSTPCSRRMVCPGTR*VE-HNCRRT-SRRHRSA 183
            C +CSS F++ P  +R++CP    V    CR+   R+H  +
Sbjct: 2299 CIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGS 2339


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,443,503
Number of Sequences: 53049
Number of extensions: 129077
Number of successful extensions: 351
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)