Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_F17
(723 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 25 0.72
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 1.3
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 23 2.9
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 23 2.9
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 3.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 3.9
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 6.7
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 6.7
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 6.7
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 22 6.7
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 6.7
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 25.0 bits (52), Expect = 0.72
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 63 LEEANETQQLMQNEGEDDEQKIPQSATSPVTSNKIS 170
LEE + +L+ E E+ + + SP+T N+I+
Sbjct: 23 LEETQQALELINLENFFPEENVVEELLSPLTLNRIT 58
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 528 ENSASRDKMEQLVKSLEQLSNSIERLHCDTNPC 626
E + S DK E + S+ +S +++RLH +T+PC
Sbjct: 691 EQTESDDK-EGYLHSV--VSGALDRLHYETDPC 720
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 276 DVFHLRTTPSWIRLD 232
D+ HLR T W+R D
Sbjct: 218 DILHLRHTKIWLRPD 232
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 23.0 bits (47), Expect = 2.9
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = +3
Query: 60 HLEEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLN 239
H++ ++M+ + + +EQ+ Q S +T S+++ L + K + N
Sbjct: 166 HMDSVEYKPEIMEYKPDVEEQRYKQVEISQMTEPSSSTKSYVLEGPRNGKRKRKSSTIEN 225
Query: 240 ES 245
ES
Sbjct: 226 ES 227
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 3.9
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +3
Query: 297 SNYTNRPKNIPKETPDVKNMEKALLELLDDFH 392
S Y+ P +PK P K + L D H
Sbjct: 370 STYSGSPTELPKHLPTSLTKSKMEVMELSDLH 401
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 538 AEFSKLSSVGLSTSAHKRK 482
+EFSK+S V STS RK
Sbjct: 4 SEFSKISKVDRSTSPLPRK 22
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 6.7
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 152 DRRSRTLWYLLFVIFTFI 99
DRRSR ++ + F+IF +
Sbjct: 445 DRRSRIVFPVAFIIFNIL 462
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 546 DKMEQLVKSLEQLSNSIERLHCDTNPCSSTE 638
D+ QL+ +LE + ++RL +TN + E
Sbjct: 363 DQHSQLIDTLENVLAIVDRLMDETNQLTLQE 393
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 546 DKMEQLVKSLEQLSNSIERLHCD 614
DKM+ LV+ L+ + L CD
Sbjct: 42 DKMKTLVEELKSKPGKLVPLQCD 64
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 228 NSLNESTKVSYVNERRLQRD 287
N LNE + + ERR+ RD
Sbjct: 97 NELNEMCPLEKLKERRIWRD 116
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +3
Query: 111 DDEQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLNE 242
D+ K P+ + P+ +N + S+ KN+ GN ++E
Sbjct: 188 DETAKKPRVLSPPLNNNDATPTDFSMGVKNNHVSSKVEGNGVHE 231
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,296
Number of Sequences: 438
Number of extensions: 4199
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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