Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_F16
         (745 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0165 + 15274448-15277336                                         29   2.9  
10_08_0773 + 20474642-20475835                                         29   3.9  
10_08_0581 + 18930601-18930777,18930856-18930965,18931037-189313...    29   3.9  
08_01_0354 - 3113931-3113933,3114229-3114244,3114343-3114542,311...    28   9.0  

>09_04_0165 + 15274448-15277336
          Length = 962

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 217 CKEVGCCDICCLRYLGLKNPATYENYKEY 303
           CKE GCCD     Y  +   AT+ N + Y
Sbjct: 586 CKEAGCCDDAVRIYNQMPKSATHPNLRIY 614


>10_08_0773 + 20474642-20475835
          Length = 397

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 VSCLGILQEENWSECFNMVKETLEKKRYECST 552
           VS LG LQ+EN    +++ KETL  +  +CS+
Sbjct: 364 VSVLGSLQQENVHFLYDLKKETLSFEPADCSS 395


>10_08_0581 +
           18930601-18930777,18930856-18930965,18931037-18931307,
           18931403-18931541,18932410-18932630,18932723-18932769,
           18933390-18933755,18934049-18934127,18934697-18934890,
           18935305-18935422
          Length = 573

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 607 ILHLSDAFKDYKEDTLTPLKEAWKWTFGVKLAEQIG 714
           I H  + ++D    T  P+   W WT+  ++ +QIG
Sbjct: 99  IQHRKNCWQDGVLGTNCPIPSGWNWTYEFQVKDQIG 134


>08_01_0354 -
           3113931-3113933,3114229-3114244,3114343-3114542,
           3114653-3114731,3114844-3115209,3115557-3115773,
           3116455-3116593,3116958-3117228,3117986-3118095,
           3118967-3119122
          Length = 518

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 622 DAFKDYKEDTLTPLKEAWKWTFGVKLAEQIG 714
           ++++D    T  P+   W WT+  +L +QIG
Sbjct: 97  NSWQDGVAGTNCPIPPGWNWTYQFQLKDQIG 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,279,386
Number of Sequences: 37544
Number of extensions: 256326
Number of successful extensions: 509
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)