Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_F14
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   1.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.6  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.5  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   4.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.6  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   6.1  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   6.1  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   6.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
 Frame = +2

Query: 635 CNQTR---HPTRTGGLPSXAQKDPRRW 706
           CN  R   +PTR    P  AQ + RRW
Sbjct: 371 CNSARSNKYPTRVPHRPYVAQYNARRW 397


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 184 SGTCRICWQPLLTYQNQKLLTNIYWSYSSEDVEWTWIGLDQNWK 315
           SGT       +L+Y N+     I  + ++ D  W  +GL+ N K
Sbjct: 371 SGTFGFFGTHILSYINKASFKKIVNTVATFDETWAKLGLEINHK 414


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 417 LPKLTDEGLRITVFIIKPGYPESSAD 494
           +PK T EG++  +F++   Y +   D
Sbjct: 588 IPKGTPEGMKSQLFVMISNYDDDKID 613


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 409 MSQNLQTSLRGGSFKDMYS 353
           ++Q+LQT L  GS+ D+ S
Sbjct: 429 LNQHLQTGLPAGSYCDVIS 447


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 409 MSQNLQTSLRGGSFKDMYS 353
           ++Q+LQT L  GS+ D+ S
Sbjct: 430 LNQHLQTGLPAGSYCDVIS 448


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 286 SIRHPRTNSSNRCL 245
           SIRHP +N S R +
Sbjct: 288 SIRHPESNPSERVM 301


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 226 QNQKLLTNIYWSYSSEDVEWTW 291
           +NQ L+TNI+ S    D    W
Sbjct: 46  KNQLLITNIWLSLEWNDYNLKW 67


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 226 QNQKLLTNIYWSYSSEDVEWTW 291
           +NQ L+TNI+ S    D    W
Sbjct: 46  KNQLLITNIWLSLEWNDYNLKW 67


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 280  EWTWIGLDQNWKH 318
            EW + GLD +W++
Sbjct: 2432 EWNFDGLDLDWEY 2444


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,670
Number of Sequences: 336
Number of extensions: 3437
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)