Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_F14
(760 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC5H10.08c |pan6||pantoate-beta-alanine ligase |Schizosaccharo... 31 0.18
SPAC227.14 |||nicotinamide riboside kinase|Schizosaccharomyces p... 31 0.24
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.9
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 26 5.1
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.1
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 26 6.7
SPCC4B3.13 |||MatE family transporter|Schizosaccharomyces pombe|... 26 6.7
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 26 6.7
SPBC23G7.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 6.7
SPBP8B7.18c |||phosphomethylpyrimidine kinase|Schizosaccharomyce... 25 8.9
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 25 8.9
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 25 8.9
>SPAC5H10.08c |pan6||pantoate-beta-alanine ligase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 283
Score = 31.1 bits (67), Expect = 0.18
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 114 PSL-KQAEVIKQELGEGPGDLERGVRDLQNMLAATPYLPEP-ETVDKHLLELFVRGCR 281
P+L K + + QEL G GDLE+ + + L+ ++P+ E D LE F G +
Sbjct: 202 PNLYKILKKLAQELSNGNGDLEKLIAETNTELSRCRFIPDQLEICDSTTLEPFTAGTK 259
>SPAC227.14 |||nicotinamide riboside kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 235
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +3
Query: 309 LEAFCIARKRHRDLYE--YISLNEPPLNDVCKFCDI-ATLP 422
++ C+ K ++E Y+ LN+PP +D CK DI A LP
Sbjct: 130 VDDICVEPKNRILIFEGNYLLLNKPPWSDACKLYDIKAYLP 170
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 2.9
Identities = 36/148 (24%), Positives = 65/148 (43%)
Frame = -1
Query: 571 TSPVISVSSFIRASLKSNVARTAAVTSAELSGYPGFIMNTVILKPSSVSFGRVAMSQNLQ 392
+SPV S S + L S+ + + TS+E + P ++ +L PSSVS + S +++
Sbjct: 100 SSPVSSYSDPATSQLPSSTSFFSP-TSSEYT--PSSTESSSLLDPSSVSSAILPSSTSVE 156
Query: 391 TSLRGGSFKDMYS*RSL*RLRAIQNASSFDLARSKSIRHPRTNSSNRCLSTVSGSGR*GV 212
S+ S + +++ L+ S S P +S++ ST S +
Sbjct: 157 VSISSSSLSSS---------DPLTSSTFSSLSSSTSSSQPSVSSTSS--STFSSAAPTST 205
Query: 211 AASIFCRSLTPRSKSPGPSPNSCFITSA 128
++S S S S S +S +TS+
Sbjct: 206 SSSYLSSSSVVSSSSSPSSSSSSTLTSS 233
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 455 YSYSQTFIGQFWKSCDVTKFTNIVE 381
Y+Y QTF+ ++S DV K N+V+
Sbjct: 710 YTYWQTFVSLPYQSKDVLKALNVVQ 734
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 5.1
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 9/134 (6%)
Frame = -1
Query: 457 NTVILKPSSVSFGRVAMSQNLQTSLRGGSFKDMY---S*RSL*RLRAIQNASSFDLARSK 287
+T + SS+S+ S ++ S+ G Y S S + ++SS + SK
Sbjct: 112 STCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSK 171
Query: 286 SIRHPRTNSSNRCLSTVSGSGR*GVAASIFCRSLTPRSKSPGPSPNS------CFITSAC 125
S +++SS+ S S S +S S + S SP S +S FITS
Sbjct: 172 SSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTT 231
Query: 124 FNEGPCKNAIVHTA 83
AIV A
Sbjct: 232 PASSSSSGAIVSNA 245
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 467 FYYEYSYSQTFIGQFWKSCDVTKFTNIVER 378
FYY +YS+ + F+K+ D F ++R
Sbjct: 1402 FYYGATYSRYLLSLFYKTNDKVNFLQFLKR 1431
>SPCC4B3.13 |||MatE family transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 539
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 286 TWIGLDQNWKHFV*LAN 336
TW L NW H V LAN
Sbjct: 517 TWCSLHVNWDHLVELAN 533
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 25.8 bits (54), Expect = 6.7
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 174 ERGVRDLQNMLAATPYLPEPETVDKHLLELFVRGCRMDLDRARSKLEAFCIARKRHRDLY 353
E+ +R+L+ + AA PEP + +H+L + G + A KL+ + LY
Sbjct: 212 EKEIRNLKRVAAAGIPCPEPILLKQHVLLMSFLGDKKGW--AYPKLKDIDMTPGEATKLY 269
Query: 354 EYISLNEPPLNDVC 395
+ ++ N L VC
Sbjct: 270 QLVARNMRILFHVC 283
>SPBC23G7.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 131
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 226 QNQKLLTNIYWSYSSEDVE 282
Q+ KLL N+ SYSSE++E
Sbjct: 73 QDVKLLNNVLVSYSSEELE 91
>SPBP8B7.18c |||phosphomethylpyrimidine kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = -3
Query: 518 CGANCCRHISRTLGVS---GFYYEYSYSQTFIGQFWKSCDVTKFTNIVER 378
C N H++R V G + EY S + WK KFTN++ +
Sbjct: 302 CSTNILNHMTRLRIVPFAPGHFIEYILSHPQVVPAWKEYINHKFTNMLAK 351
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 601 PXTFDTS*INTSPVISVSSFIRASLKSNVARTAAVTSA 488
P T TS + I SSF +SL SNV T A +S+
Sbjct: 526 PITISTSLSSFPTTIVSSSFQYSSLSSNVTTTNAQSSS 563
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 184 TPRSKSPGPSPNSCFITSACFNEGPCK 104
TP S S PS +S T A + GP K
Sbjct: 285 TPNSMSKSPSLSSLASTGASYRPGPSK 311
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,862,856
Number of Sequences: 5004
Number of extensions: 56979
Number of successful extensions: 167
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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