Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_F14
(760 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open readin... 47 6e-05
BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open read... 47 6e-05
AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open read... 47 6e-05
M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphat... 32 2.0
BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine phosph... 32 2.0
BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein. 32 2.0
BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine phosph... 32 2.0
DQ682658-1|ABG89106.1| 442|Homo sapiens tricellulin isoform c p... 32 2.6
DQ682656-1|ABG89104.1| 558|Homo sapiens tricellulin isoform a p... 32 2.6
BC033689-1|AAH33689.1| 558|Homo sapiens MARVEL domain containin... 32 2.6
AK055094-1|BAB70853.1| 457|Homo sapiens protein ( Homo sapiens ... 32 2.6
AB219937-1|BAE54514.1| 457|Homo sapiens TRICbeta protein. 32 2.6
AB219936-1|BAE54513.1| 558|Homo sapiens TRIC protein. 32 2.6
BC036713-1|AAH36713.1| 542|Homo sapiens ATG16L2 protein protein. 30 7.9
>Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 47.2 bits (107), Expect = 6e-05
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 1/192 (0%)
Frame = +3
Query: 141 KQELGEGPGDLERGVRDLQNMLAATPYLPEPETVDKHLLELFVRGCRMDLDRARSKLEAF 320
++EL E P R V+ L++M+ Y ++D L F+R + D DRA L +
Sbjct: 44 REELQEKPEWRLRDVQALRDMVRKE-YPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNY 102
Query: 321 CIARKRHRDLYEYISLNEPPLNDVCKFCDIATLPKLTDEGLRITVFIIKPGYPESSADVT 500
R+ +++ +L L DV + LP G + V I + S+ +T
Sbjct: 103 HSCRRSWPEVFN--NLKPSALKDVLASGFLTVLPHTDPRGCHV-VCIRPDRWIPSNYPIT 159
Query: 501 AAVRATLL-LSDARMKDETLITGDVFIYEVSKVXGSLXXXXXXXXXXXXXXXQLAQAAYP 677
+RA L L +ET + G V + + V SL + Q +P
Sbjct: 160 ENIRAIYLTLEKLIQSEETQVNGIVILADYKGV--SLSKASHFGPFIAKKVIGILQDGFP 217
Query: 678 XRLKRIHVVGAP 713
R+K +HVV P
Sbjct: 218 IRIKAVHVVNEP 229
>BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 47.2 bits (107), Expect = 6e-05
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 1/192 (0%)
Frame = +3
Query: 141 KQELGEGPGDLERGVRDLQNMLAATPYLPEPETVDKHLLELFVRGCRMDLDRARSKLEAF 320
++EL E P R V+ L++M+ Y ++D L F+R + D DRA L +
Sbjct: 44 REELQEKPEWRLRDVQALRDMVRKE-YPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNY 102
Query: 321 CIARKRHRDLYEYISLNEPPLNDVCKFCDIATLPKLTDEGLRITVFIIKPGYPESSADVT 500
R+ +++ +L L DV + LP G + V I + S+ +T
Sbjct: 103 HSCRRSWPEVFN--NLKPSALKDVLASGFLTVLPHTDPRGCHV-VCIRPDRWIPSNYPIT 159
Query: 501 AAVRATLL-LSDARMKDETLITGDVFIYEVSKVXGSLXXXXXXXXXXXXXXXQLAQAAYP 677
+RA L L +ET + G V + + V SL + Q +P
Sbjct: 160 ENIRAIYLTLEKLIQSEETQVNGIVILADYKGV--SLSKASHFGPFIAKKVIGILQDGFP 217
Query: 678 XRLKRIHVVGAP 713
R+K +HVV P
Sbjct: 218 IRIKAVHVVNEP 229
>AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 47.2 bits (107), Expect = 6e-05
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 1/192 (0%)
Frame = +3
Query: 141 KQELGEGPGDLERGVRDLQNMLAATPYLPEPETVDKHLLELFVRGCRMDLDRARSKLEAF 320
++EL E P R V+ L++M+ Y ++D L F+R + D DRA L +
Sbjct: 44 REELQEKPEWRLRDVQALRDMVRKE-YPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNY 102
Query: 321 CIARKRHRDLYEYISLNEPPLNDVCKFCDIATLPKLTDEGLRITVFIIKPGYPESSADVT 500
R+ +++ +L L DV + LP G + V I + S+ +T
Sbjct: 103 HSCRRSWPEVFN--NLKPSALKDVLASGFLTVLPHTDPRGCHV-VCIRPDRWIPSNYPIT 159
Query: 501 AAVRATLL-LSDARMKDETLITGDVFIYEVSKVXGSLXXXXXXXXXXXXXXXQLAQAAYP 677
+RA L L +ET + G V + + V SL + Q +P
Sbjct: 160 ENIRAIYLTLEKLIQSEETQVNGIVILADYKGV--SLSKASHFGPFIAKKVIGILQDGFP 217
Query: 678 XRLKRIHVVGAP 713
R+K +HVV P
Sbjct: 218 IRIKAVHVVNEP 229
>M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 593
Score = 32.3 bits (70), Expect = 2.0
Identities = 27/92 (29%), Positives = 37/92 (40%)
Frame = +3
Query: 438 GLRITVFIIKPGYPESSADVTAAVRATLLLSDARMKDETLITGDVFIYEVSKVXGSLXXX 617
G I +F + +P S LL A ET G VFIY++ GS
Sbjct: 106 GASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMC---GS--NY 160
Query: 618 XXXXXXXXXXXXQLAQAAYPXRLKRIHVVGAP 713
L + A+P RLK++ +VGAP
Sbjct: 161 ANFELDLGKKVLNLLKGAFPARLKKVLIVGAP 192
>BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 32.3 bits (70), Expect = 2.0
Identities = 27/92 (29%), Positives = 37/92 (40%)
Frame = +3
Query: 438 GLRITVFIIKPGYPESSADVTAAVRATLLLSDARMKDETLITGDVFIYEVSKVXGSLXXX 617
G I +F + +P S LL A ET G VFIY++ GS
Sbjct: 106 GASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMC---GS--NY 160
Query: 618 XXXXXXXXXXXXQLAQAAYPXRLKRIHVVGAP 713
L + A+P RLK++ +VGAP
Sbjct: 161 ANFELDLGKKVLNLLKGAFPARLKKVLIVGAP 192
>BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein.
Length = 583
Score = 32.3 bits (70), Expect = 2.0
Identities = 27/92 (29%), Positives = 37/92 (40%)
Frame = +3
Query: 438 GLRITVFIIKPGYPESSADVTAAVRATLLLSDARMKDETLITGDVFIYEVSKVXGSLXXX 617
G I +F + +P S LL A ET G VFIY++ GS
Sbjct: 96 GASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMC---GS--NY 150
Query: 618 XXXXXXXXXXXXQLAQAAYPXRLKRIHVVGAP 713
L + A+P RLK++ +VGAP
Sbjct: 151 ADFELDLGKKVLNLLKGAFPARLKKVLIVGAP 182
>BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 32.3 bits (70), Expect = 2.0
Identities = 27/92 (29%), Positives = 37/92 (40%)
Frame = +3
Query: 438 GLRITVFIIKPGYPESSADVTAAVRATLLLSDARMKDETLITGDVFIYEVSKVXGSLXXX 617
G I +F + +P S LL A ET G VFIY++ GS
Sbjct: 106 GASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMC---GS--NY 160
Query: 618 XXXXXXXXXXXXQLAQAAYPXRLKRIHVVGAP 713
L + A+P RLK++ +VGAP
Sbjct: 161 ANFELDLGKKVLNLLKGAFPARLKKVLIVGAP 192
>DQ682658-1|ABG89106.1| 442|Homo sapiens tricellulin isoform c
protein.
Length = 442
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 327 ARKRHRDLYEYISLNEPPLNDVCKFCDIAT 416
A +RHR+ E +NEP L+ K C++AT
Sbjct: 254 AARRHREYMEQQEINEPSLSSKRKMCEMAT 283
>DQ682656-1|ABG89104.1| 558|Homo sapiens tricellulin isoform a
protein.
Length = 558
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 327 ARKRHRDLYEYISLNEPPLNDVCKFCDIAT 416
A +RHR+ E +NEP L+ K C++AT
Sbjct: 370 AARRHREYMEQQEINEPSLSSKRKMCEMAT 399
>BC033689-1|AAH33689.1| 558|Homo sapiens MARVEL domain containing 2
protein.
Length = 558
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 327 ARKRHRDLYEYISLNEPPLNDVCKFCDIAT 416
A +RHR+ E +NEP L+ K C++AT
Sbjct: 370 AARRHREYMEQQEINEPSLSSKRKMCEMAT 399
>AK055094-1|BAB70853.1| 457|Homo sapiens protein ( Homo sapiens
cDNA FLJ30532 fis, clone BRAWH2001129, weakly similar to
OCCLUDIN. ).
Length = 457
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 327 ARKRHRDLYEYISLNEPPLNDVCKFCDIAT 416
A +RHR+ E +NEP L+ K C++AT
Sbjct: 370 AARRHREYMEQQEINEPSLSSKRKMCEMAT 399
>AB219937-1|BAE54514.1| 457|Homo sapiens TRICbeta protein.
Length = 457
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 327 ARKRHRDLYEYISLNEPPLNDVCKFCDIAT 416
A +RHR+ E +NEP L+ K C++AT
Sbjct: 370 AARRHREYMEQQEINEPSLSSKRKMCEMAT 399
>AB219936-1|BAE54513.1| 558|Homo sapiens TRIC protein.
Length = 558
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 327 ARKRHRDLYEYISLNEPPLNDVCKFCDIAT 416
A +RHR+ E +NEP L+ K C++AT
Sbjct: 370 AARRHREYMEQQEINEPSLSSKRKMCEMAT 399
>BC036713-1|AAH36713.1| 542|Homo sapiens ATG16L2 protein protein.
Length = 542
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 120 LKQAEVIKQELGEGPGDLERGVRDLQNMLAATPYLPEPETVDKHLLELFVRGCR 281
LK+A + EGP L G+R+ + LA +PEPE ++K E + R R
Sbjct: 148 LKKAAKRTVSISEGPDTLGDGMRERRETLA---LVPEPEPLEKEACEKWKRPFR 198
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,223,433
Number of Sequences: 237096
Number of extensions: 2297810
Number of successful extensions: 13574
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13571
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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