Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_F01
(717 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC576.03c |tpx1||thioredoxin peroxidase Tpx1|Schizosaccharomyc... 64 3e-11
SPBC1773.02c |||thioredoxin peroxidase|Schizosaccharomyces pombe... 42 7e-05
SPAC27D7.12c |but1|SPAC27D7.12, mug107|neddylation pathway prote... 30 0.38
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 29 0.88
SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+] |Schizosacc... 29 0.88
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 2.7
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 27 3.5
SPBC685.09 |orc2|orp2|origin recognition complex subunit Orc2|Sc... 27 3.5
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 26 6.2
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 26 6.2
SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|... 25 8.2
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch... 25 8.2
SPBC336.13c |||mitochondrial inner membrane peptidase complex ca... 25 8.2
SPAC1071.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 8.2
>SPCC576.03c |tpx1||thioredoxin peroxidase Tpx1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 192
Score = 63.7 bits (148), Expect = 3e-11
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Frame = +2
Query: 227 LLLGKTFPDFSA----NTTEGEINFHEWLGDKWGILFSHPSDFTPVCTTELARVLVLLPE 394
L +GK PDF N EI ++ G KW L +P DFT VC TE+ +
Sbjct: 3 LQIGKPAPDFKGTAVVNGAFEEIKLADYKG-KWVFLGFYPLDFTFVCPTEIVAFSEAASK 61
Query: 395 FVKRNTKVIGLSCDSVSSHLEWCKDIKSFAGCNEDEPFPYPIIEDEKRELANKLGMIDND 574
F +RN +VI S DS SHL + + G P++ D +++ G++ D
Sbjct: 62 FAERNAQVILTSTDSEYSHLAFINTPRKEGGLG---GINIPLLADPSHKVSRDYGVLIED 118
Query: 575 ELDHKGMPLTARAVFIVDPNKKFXLSILYPATTGRNFDXILRILDS 712
+ R +F++DP + GR+ D LR+LD+
Sbjct: 119 ------AGVAFRGLFLIDPKGVLRQITINDLPVGRSVDEALRLLDA 158
>SPBC1773.02c |||thioredoxin peroxidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 195
Score = 42.3 bits (95), Expect = 7e-05
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +2
Query: 233 LGKTFPDFSANTTEG-EINFHEWLGDKWGILFSHPSDFTPVCTTELARVLVLLPEFVKRN 409
+G PD + +G I + +K ++F++P TP CT + P+ +
Sbjct: 48 VGDVIPDITLPDEDGTSIRLRDITANKGLVIFAYPKASTPGCTKQGCGFRDNYPKIQASD 107
Query: 410 TKVIGLSCDSVSSHLEWCKDIKSFAGCNEDEPFPYPIIEDEKRELANKLG 559
+V+GLS D+ + K+F + + FPY ++ D K EL KLG
Sbjct: 108 YEVLGLSFDTSKAQ-------KAF---KDKQNFPYHLLSDPKGELIKKLG 147
>SPAC27D7.12c |but1|SPAC27D7.12, mug107|neddylation pathway protein
But1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 243
Score = 29.9 bits (64), Expect = 0.38
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 407 NTKVIGLSCDSVSSHLEWCKDIKSFAGCNEDEPFPYPIIEDEKRELANKLGMI 565
NT VIG++ D+V + +W + F P+I D E+ ++GM+
Sbjct: 141 NTDVIGITTDTVENICQWKAHLPRAL------QFSLPVISDSNNEICREMGML 187
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 28.7 bits (61), Expect = 0.88
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = -1
Query: 321 SIPHLSPSHS*KF-ISPSVVLAE--KSGKVLPSKSMLKIYFKNIFLSVFRVFFL 169
SIP P+H F I P ++L E ++GK+LP + ++ Y N+FL + + L
Sbjct: 1034 SIPF--PTHHNFFSIIPFILLTEILRTGKMLPRLNDVEYYINNVFLFLLSFYSL 1085
>SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+]
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 431
Score = 28.7 bits (61), Expect = 0.88
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 305 DKWGILFSHPSDFTPVCTTELARVLVLLPEFVKRNTKVIGLSCDSVSSHLEWCKDIKSF 481
D W L HP + +C+T L R+ V + E+V R+ ++ + + H ++ D F
Sbjct: 319 DSWSKLGIHPQNHM-ICSTPLFRLWVGVSEYVFRHPGLLDSCIYTATKHNDFSPDDLEF 376
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 416 VIGLSCDSVSSHLEWCKDIKSFAGCNEDEPFPYPIIEDEK--RELANK 553
++GLS V+ +E + ++ D+P + EDE+ RELAN+
Sbjct: 55 LLGLSDPQVAEEMEQAETSYAYDTAAHDDPVQRQLEEDERCARELANR 102
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -1
Query: 483 AKDLMSLHHSK*EDTLSQDRPMTFVLRFTNSGRRTSTRANSVVQTGVKSD 334
AK L S H S EDT D+P F + R S S G SD
Sbjct: 245 AKILNSSHGSHEEDTHHADKPQAHSRSFVGTARYVSPEVLSDKIAGTASD 294
>SPBC685.09 |orc2|orp2|origin recognition complex subunit
Orc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = -3
Query: 619 EDCTGCQRHS-FVIQFVIVN----HAELVGQLSLLVFNYRIRKWFVFIATSKRLNVLAPF 455
E CT ++H+ ++ F N + ELV +LL + + ++ F+ K+L F
Sbjct: 227 EICTETEQHTQTLVHFQSRNFHQWYFELVNNFNLLFYGFGSKEHFLSSFVEKKLPCFPIF 286
Query: 454 QVRGY 440
V+GY
Sbjct: 287 VVKGY 291
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 25.8 bits (54), Expect = 6.2
Identities = 17/67 (25%), Positives = 25/67 (37%)
Frame = -3
Query: 583 IQFVIVNHAELVGQLSLLVFNYRIRKWFVFIATSKRLNVLAPFQVRGYTVTGQANDFCVA 404
I +I N+AE G F R W K + +R + G DF V
Sbjct: 1209 IAIIISNYAERTGSA---FFTAEQRAWLELRRKIKSMRPSKRPAIRPLGLRGLCYDFAVQ 1265
Query: 403 LHKLWKK 383
H +W++
Sbjct: 1266 KHGIWRR 1272
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = -1
Query: 234 SKSMLKIYFKNIFLSVFRVFFLRQITQYYKSNYTSVKRSIQIQYTKDT 91
+K +L Y ++ + V +++FL S+ + RSI + ++ DT
Sbjct: 518 TKEVLSQYTPSVVIGVLKLYFLELPDSIVPSSAFELIRSIYMNHSNDT 565
>SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 712
Score = 25.4 bits (53), Expect = 8.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 323 FSHPSDFTPVCTTELARVLVL 385
+SHP DF P+ TE +V+ +
Sbjct: 189 YSHPLDFCPIIDTEDQKVVAI 209
>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 783
Score = 25.4 bits (53), Expect = 8.2
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 631 RID--NEDCTGCQRHSFVIQFVIVNHAELVGQLSLLVFNY 518
R+D NEDC RH + ++ NH++L S +NY
Sbjct: 555 RVDRINEDCILAARHLISLVHLLQNHSQL-SCYSFFDYNY 593
>SPBC336.13c |||mitochondrial inner membrane peptidase complex
catalytic subunit 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 180
Score = 25.4 bits (53), Expect = 8.2
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = -1
Query: 234 SKSMLKIYFKNIFLSVFRVFFLRQITQYYKSNYTSVKRSIQIQYTKDTXMLVF*IEYKDA 55
++S ++FKN+ V L + Q+ S T RS++ + +T ML +D
Sbjct: 8 NQSFKSVFFKNLVGITLWVPVLMFVEQHVVSVGTIEGRSMKPAFNPETNML-----QRDR 62
Query: 54 ALIFIACQIFKRGD 13
L++ + +KRGD
Sbjct: 63 VLLWKWNKDYKRGD 76
>SPAC1071.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 338
Score = 25.4 bits (53), Expect = 8.2
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 278 EINFHEWLGDK 310
E+NF+EWL DK
Sbjct: 291 EVNFYEWLNDK 301
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,919,175
Number of Sequences: 5004
Number of extensions: 60992
Number of successful extensions: 179
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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