Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_F01
         (717 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical...   158   3e-39
U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin ...    74   9e-14
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...    68   6e-12
U40942-4|AAC47069.2|  486|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U40942-3|AAU05564.1|  487|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z47812-12|CAE48507.1|  719|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z47812-11|CAA87796.1|  796|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z47811-6|CAE48505.1|  719|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z47811-5|CAA87788.1|  796|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81449-6|CAB03764.2|  489|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81449-5|CAB03762.2|  488|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z92809-4|CAI06053.1|  615|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AM748822-1|CAO72176.1|  591|Caenorhabditis elegans hexosaminidas...    29   4.4  
AL023839-4|CAA19506.2|  615|Caenorhabditis elegans Hypothetical ...    29   4.4  
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical...    29   4.4  
Z50177-1|CAA90543.2|  607|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U80450-4|AAB37829.1|  926|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.11 protein.
          Length = 231

 Score =  158 bits (384), Expect = 3e-39
 Identities = 77/163 (47%), Positives = 107/163 (65%), Gaps = 2/163 (1%)
 Frame = +2

Query: 233 LGKTFPDFSANTT-EGEINFHEWLGDKWGILFSHPSDFTPVCTTELARVLVLLPEFVKRN 409
           LG T P+F+  T        H ++G++W +LFSHP+DFTPVCTTELA ++ L PEF KR+
Sbjct: 3   LGDTVPNFTFETDLRKNQTLHNYIGEQWLMLFSHPADFTPVCTTELAELVKLAPEFRKRH 62

Query: 410 TKVIGLSCDSVSSHLEWCKDIKSFAG-CNEDEPFPYPIIEDEKRELANKLGMIDNDELDH 586
            +++ +S DS  +H +W KDI S A   N     P+ II D  R +  +LGMID DE++ 
Sbjct: 63  VQILAISIDSSETHRDWAKDINSVAQLSNCGSHLPFEIIADTDRSICTELGMIDPDEMNS 122

Query: 587 KGMPLTARAVFIVDPNKKFXLSILYPATTGRNFDXILRILDSL 715
           +G+ L+ARAV +  P+KK    ILYPAT GRNF  ILR++D +
Sbjct: 123 EGICLSARAVMLFGPDKKLKSKILYPATFGRNFVEILRMVDGV 165


>U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin
           protein 2 protein.
          Length = 195

 Score = 74.1 bits (174), Expect = 9e-14
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
 Frame = +2

Query: 233 LGKTFPDFSANTT-EGE---INFHEWLGDKWGILFSHPSDFTPVCTTELARVLVLLPEFV 400
           +GK  P F      +GE   ++  ++ G K+ +LF +P DFT VC TE+        EF 
Sbjct: 6   IGKPAPQFKTQAVVDGEFVDVSLSDYKG-KYVVLFFYPLDFTFVCPTEIIAFSDRAEEFK 64

Query: 401 KRNTKVIGLSCDSVSSHLEWCKDIKSFAGCNEDEPFPYPIIEDEKRELANKLGMIDNDEL 580
             NT V+  S DSV SHL W    +   G  E      P++ D   +++   G++  DE 
Sbjct: 65  AINTVVLAASTDSVFSHLAWINQPRKHGGLGE---MNIPVLADTNHQISRDYGVLKEDE- 120

Query: 581 DHKGMPLTARAVFIVDPNKKFXLSILYPATTGRNFDXILRILDS 712
                 +  R +FI+DP++      +     GR+ D  LR++ +
Sbjct: 121 -----GIAFRGLFIIDPSQNLRQITINDLPVGRSVDETLRLVQA 159


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 40/133 (30%), Positives = 64/133 (48%)
 Frame = +2

Query: 308 KWGILFSHPSDFTPVCTTELARVLVLLPEFVKRNTKVIGLSCDSVSSHLEWCKDIKSFAG 487
           KW ++F +P DFT VC TE+        EF     +V+  SCDS  SHL W    +   G
Sbjct: 63  KWLVMFFYPLDFTFVCPTEIIAYGDRANEFRSLGAEVVACSCDSHFSHLAWVNTPRKDGG 122

Query: 488 CNEDEPFPYPIIEDEKRELANKLGMIDNDELDHKGMPLTARAVFIVDPNKKFXLSILYPA 667
             +      P++ D  +++A+  G++D      K   L+ R +F++DP+     +     
Sbjct: 123 LGD---MDIPLLADFNKKIADSFGVLD------KESGLSYRGLFLIDPSGTVRHTTCNDL 173

Query: 668 TTGRNFDXILRIL 706
             GR+ D  LR+L
Sbjct: 174 PVGRSVDETLRVL 186


>U40942-4|AAC47069.2|  486|Caenorhabditis elegans Hypothetical
           protein K02E10.4a protein.
          Length = 486

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = -2

Query: 530 RLQLSDKEMVRLHCNQQKT*CPCTIPSERIHCHRTGQ*LLCCASQTLEEGRAPEP 366
           +L + D   + + C+Q    CP     E +HC   G   +CC   + +   AP P
Sbjct: 155 KLTVLDPHGLPMKCSQIARSCP----GENMHCADVGLGYICCEDPSFQRKHAPPP 205


>U40942-3|AAU05564.1|  487|Caenorhabditis elegans Hypothetical
           protein K02E10.4b protein.
          Length = 487

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = -2

Query: 530 RLQLSDKEMVRLHCNQQKT*CPCTIPSERIHCHRTGQ*LLCCASQTLEEGRAPEP 366
           +L + D   + + C+Q    CP     E +HC   G   +CC   + +   AP P
Sbjct: 156 KLTVLDPHGLPMKCSQIARSCP----GENMHCADVGLGYICCEDPSFQRKHAPPP 206


>Z47812-12|CAE48507.1|  719|Caenorhabditis elegans Hypothetical
           protein T05H10.7b protein.
          Length = 719

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 530 EKRELANKLGMIDNDELDHKGMPLTARAVFIVDPNKKFXLSILYP 664
           +K+E   KL     +E D K  P    A+  VDP+  F + + YP
Sbjct: 434 QKKENVKKLVEAGEEEEDFKPFPTLLEALTKVDPDVGFNVEVKYP 478


>Z47812-11|CAA87796.1|  796|Caenorhabditis elegans Hypothetical
           protein T05H10.7a protein.
          Length = 796

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 530 EKRELANKLGMIDNDELDHKGMPLTARAVFIVDPNKKFXLSILYP 664
           +K+E   KL     +E D K  P    A+  VDP+  F + + YP
Sbjct: 511 QKKENVKKLVEAGEEEEDFKPFPTLLEALTKVDPDVGFNVEVKYP 555


>Z47811-6|CAE48505.1|  719|Caenorhabditis elegans Hypothetical
           protein T05H10.7b protein.
          Length = 719

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 530 EKRELANKLGMIDNDELDHKGMPLTARAVFIVDPNKKFXLSILYP 664
           +K+E   KL     +E D K  P    A+  VDP+  F + + YP
Sbjct: 434 QKKENVKKLVEAGEEEEDFKPFPTLLEALTKVDPDVGFNVEVKYP 478


>Z47811-5|CAA87788.1|  796|Caenorhabditis elegans Hypothetical
           protein T05H10.7a protein.
          Length = 796

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 530 EKRELANKLGMIDNDELDHKGMPLTARAVFIVDPNKKFXLSILYP 664
           +K+E   KL     +E D K  P    A+  VDP+  F + + YP
Sbjct: 511 QKKENVKKLVEAGEEEEDFKPFPTLLEALTKVDPDVGFNVEVKYP 555


>Z81449-6|CAB03764.2|  489|Caenorhabditis elegans Hypothetical
           protein C46F11.5b protein.
          Length = 489

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = -3

Query: 475 LNVLAPFQVRGYTVTGQANDFCVALHKLWKKDEHPSQFCCADRGEV*WVREQYTPLIS*P 296
           +++L   QVR       A   C+ ++ +W+ +E  S+   A R  V W       LI  P
Sbjct: 100 IHLLRAEQVRLACYAAYATLACLLVNPVWEHNEVNSKIASATRRTVSWFGSWIQYLIITP 159

Query: 295 LVKIY 281
           +V +Y
Sbjct: 160 VVTVY 164


>Z81449-5|CAB03762.2|  488|Caenorhabditis elegans Hypothetical
           protein C46F11.5a protein.
          Length = 488

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = -3

Query: 475 LNVLAPFQVRGYTVTGQANDFCVALHKLWKKDEHPSQFCCADRGEV*WVREQYTPLIS*P 296
           +++L   QVR       A   C+ ++ +W+ +E  S+   A R  V W       LI  P
Sbjct: 100 IHLLRAEQVRLACYAAYATLACLLVNPVWEHNEVNSKIASATRRTVSWFGSWIQYLIITP 159

Query: 295 LVKIY 281
           +V +Y
Sbjct: 160 VVTVY 164


>Z92809-4|CAI06053.1|  615|Caenorhabditis elegans Hypothetical
           protein Y39A1C.4 protein.
          Length = 615

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +2

Query: 383 LLPEFVKRNTKVIGLSCDSVSSHLEWCKDIKSFAGCNEDEPFPYPI 520
           +L E  K + ++I L       HLEW   ++ FA   ED  FP  I
Sbjct: 174 ILQEAQKHHLQIIPLV--QTMGHLEWILKLEEFAHLREDTRFPQVI 217


>Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical
           protein F23H12.6 protein.
          Length = 1025

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -1

Query: 171 LRQITQYYKSNYTSVKRSIQIQYTKDTXMLVF*IE-YKDAALIFIACQIFKRGDKKK 4
           L QIT    SNYTS+ R+IQI Y +    LV  +E  K  + IF  C + + GD K+
Sbjct: 148 LEQITS--DSNYTSLSRTIQI-YDQSYTNLVRQLEKLKTVSRIFTVC-LPEAGDIKR 200


>AM748822-1|CAO72176.1|  591|Caenorhabditis elegans hexosaminidase
           protein.
          Length = 591

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +2

Query: 383 LLPEFVKRNTKVIGLSCDSVSSHLEWCKDIKSFAGCNEDEPFPYPI 520
           +L E  K + ++I L       HLEW   ++ FA   ED  FP  I
Sbjct: 174 ILQEAQKHHLQIIPLV--QTMGHLEWILKLEEFAHLREDTRFPQVI 217


>AL023839-4|CAA19506.2|  615|Caenorhabditis elegans Hypothetical
           protein Y39A1C.4 protein.
          Length = 615

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +2

Query: 383 LLPEFVKRNTKVIGLSCDSVSSHLEWCKDIKSFAGCNEDEPFPYPI 520
           +L E  K + ++I L       HLEW   ++ FA   ED  FP  I
Sbjct: 174 ILQEAQKHHLQIIPLV--QTMGHLEWILKLEEFAHLREDTRFPQVI 217


>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
           protein Y47G6A.29 protein.
          Length = 2460

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 438 VYPLTWNGARTLSLLLVAMKTNHFLI 515
           VYPLTWNG +T ++     K N + +
Sbjct: 447 VYPLTWNGEQTWTIDYAFTKANAWFV 472


>Z50177-1|CAA90543.2|  607|Caenorhabditis elegans Hypothetical
           protein F46G10.2 protein.
          Length = 607

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 629 PNKKFXLSILYPATTGRNFDXILRILDSL 715
           P K F + ++ P  +GR+ D ++RI D+L
Sbjct: 390 PKKAFKVMLVCPEVSGRDEDFMMRIADAL 418


>U80450-4|AAB37829.1|  926|Caenorhabditis elegans Hypothetical
           protein M01E11.3 protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = +2

Query: 518 IIEDEKRELANKLGMIDNDELDHKGMPLTARAVFIVDPNKKFXLSILYP 664
           IIED+KR + N   M +N E D+K     +    +  PN +  LSIL P
Sbjct: 649 IIEDDKRNVYNGYNMNNNIERDNK---YDSSMNGMPQPNLQHPLSILPP 694


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,096,313
Number of Sequences: 27780
Number of extensions: 344211
Number of successful extensions: 830
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)