Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_E24
(831 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical pr... 134 7e-32
U49829-3|AAA93384.1| 724|Caenorhabditis elegans Hypothetical pr... 124 1e-28
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr... 100 1e-21
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb... 100 1e-21
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical ... 35 0.082
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 35 0.082
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 29 5.4
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 29 5.4
U58750-1|AAB00641.1| 307|Caenorhabditis elegans Hypothetical pr... 28 9.4
>Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical
protein F32B6.2 protein.
Length = 671
Score = 134 bits (324), Expect = 7e-32
Identities = 60/100 (60%), Positives = 78/100 (78%)
Frame = +3
Query: 531 ISKVLIANRGEIACRVMRTAKKLGVRTVAVYSDADRHAMHVEMADEAYHIGPAPSTQSYL 710
I +VL+ANRGEIA RV TA+K+G+ TVAV+SDADR+++ V+ AD+AYHIGP + +SYL
Sbjct: 19 IQRVLVANRGEIAIRVQNTARKMGIETVAVFSDADRNSLFVKKADKAYHIGPPLAAESYL 78
Query: 711 NASKILEVAKKSNSQAIHPGYGFLSENVEFCEKCASEDII 830
N KI+ A +S +QAIHPGYGFLSEN F EKCA ++
Sbjct: 79 NMDKIINSALRSGAQAIHPGYGFLSENAGFAEKCAQAGLV 118
>U49829-3|AAA93384.1| 724|Caenorhabditis elegans Hypothetical
protein F27D9.5 protein.
Length = 724
Score = 124 bits (298), Expect = 1e-28
Identities = 52/91 (57%), Positives = 75/91 (82%)
Frame = +3
Query: 528 QISKVLIANRGEIACRVMRTAKKLGVRTVAVYSDADRHAMHVEMADEAYHIGPAPSTQSY 707
+ K+LIANRGEIACRV++TA+ +G++TVAV+SD D +++HV+MADEA +G AP+ +SY
Sbjct: 48 KFDKILIANRGEIACRVIKTARAMGIKTVAVHSDVDSNSLHVKMADEAVCVGEAPTAKSY 107
Query: 708 LNASKILEVAKKSNSQAIHPGYGFLSENVEF 800
L A +IL+ + + +QA+HPGYGFLSEN +F
Sbjct: 108 LRADRILQAVEDTGAQAVHPGYGFLSENTKF 138
>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical
protein D2023.2 protein.
Length = 1175
Score = 100 bits (239), Expect = 1e-21
Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Frame = +3
Query: 516 VQRTQISKVLIANRGEIACRVMRTAKKLGVRTVAVYSDADRHAMHVEMADEAYHIGPA-P 692
++ + +KV++ANRGEIA RV R +L +VA+Y++ D+++MH ADEAY +G P
Sbjct: 27 IKPREFNKVMVANRGEIAIRVFRALTELNKTSVAIYAEQDKNSMHRLKADEAYLVGKGLP 86
Query: 693 STQSYLNASKILEVAKKSNSQAIHPGYGFLSENVEFCEKCASEDII 830
+YL +I+E A K N AIHPGYGFLSE +F C + I+
Sbjct: 87 PVAAYLTIDQIIETALKHNIDAIHPGYGFLSERSDFAAACQNAGIV 132
>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
carboxylase protein.
Length = 1175
Score = 100 bits (239), Expect = 1e-21
Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Frame = +3
Query: 516 VQRTQISKVLIANRGEIACRVMRTAKKLGVRTVAVYSDADRHAMHVEMADEAYHIGPA-P 692
++ + +KV++ANRGEIA RV R +L +VA+Y++ D+++MH ADEAY +G P
Sbjct: 27 IKPREFNKVMVANRGEIAIRVFRALTELNKTSVAIYAEQDKNSMHRLKADEAYLVGKGLP 86
Query: 693 STQSYLNASKILEVAKKSNSQAIHPGYGFLSENVEFCEKCASEDII 830
+YL +I+E A K N AIHPGYGFLSE +F C + I+
Sbjct: 87 PVAAYLTIDQIIETALKHNIDAIHPGYGFLSERSDFAAACQNAGIV 132
>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical
protein T28F3.5 protein.
Length = 1679
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Frame = +3
Query: 531 ISKVLIANRGEIACRVMRTAKK-----LGVRTVAVY-----SDADRHAMH-VEMADEAYH 677
I ++L+AN G A + + + ++ G V + D R A H +++ADE
Sbjct: 30 IKRILVANNGLAAMKCLISIRQWLQNQFGTSGVVSFVCIATEDEMRSASHYLKLADEIVM 89
Query: 678 IGPAPSTQSYLNASKILEVAKKSNSQAIHPGYGFLSENVEFCEKCASEDII 830
+++++ N I+ +A ++ A++ G+G SEN E C + +II
Sbjct: 90 APAGSNSKNFANCDVIIRLAVEAQVDAVYVGWGHASENPELCRRLELNNII 140
>AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical
protein W09B6.1b protein.
Length = 813
Score = 34.7 bits (76), Expect = 0.082
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Frame = +3
Query: 486 RYNHAQIKEKVQRTQISKVLIANRGEIACRVMRTAKKLGVRT---------VAVYSDADR 638
++ H+ + + +R I ++L+A G A R + TAKK T V + ++ +
Sbjct: 33 QFIHSHVADIEKRRPIKRLLVATNGIAAMRCLMTAKKFLHHTFRNDNLIHFVCMTTEDEI 92
Query: 639 HAMHVEMADEAYHIGPAPS---TQSYLNASKILEVAKKSNSQAIHPGYGFLSENVEFCEK 809
+M + + +PS ++ N +IL+ A K A+ G+G SEN + +
Sbjct: 93 QSMSESLRMPNITLAESPSGTNKNNFANVDEILKHAIKYEVDAVWAGWGHASENPDLPRR 152
Query: 810 CASEDI 827
+I
Sbjct: 153 LNDHNI 158
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 34.7 bits (76), Expect = 0.082
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Frame = +3
Query: 486 RYNHAQIKEKVQRTQISKVLIANRGEIACRVMRTAKKLGVRT---------VAVYSDADR 638
++ H+ + + +R I ++L+A G A R + TAKK T V + ++ +
Sbjct: 33 QFIHSHVADIEKRRPIKRLLVATNGIAAMRCLMTAKKFLHHTFRNDNLIHFVCMTTEDEI 92
Query: 639 HAMHVEMADEAYHIGPAPS---TQSYLNASKILEVAKKSNSQAIHPGYGFLSENVEFCEK 809
+M + + +PS ++ N +IL+ A K A+ G+G SEN + +
Sbjct: 93 QSMSESLRMPNITLAESPSGTNKNNFANVDEILKHAIKYEVDAVWAGWGHASENPDLPRR 152
Query: 810 CASEDI 827
+I
Sbjct: 153 LNDHNI 158
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +2
Query: 458 STDNTSEQYKVQPCTNQRESSKNTDQQSIDSKQRGDSMSGHENCKEIGSQD 610
S+++ E K + N ESSK ++++I + RGD + + + ++D
Sbjct: 728 SSESEPEPPKKKKKKNSEESSKKKEKENIGRRDRGDKRAERHRDQSVENKD 778
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +2
Query: 458 STDNTSEQYKVQPCTNQRESSKNTDQQSIDSKQRGDSMSGHENCKEIGSQD 610
S+++ E K + N ESSK ++++I + RGD + + + ++D
Sbjct: 728 SSESEPEPPKKKKKKNSEESSKKKEKENIGRRDRGDKRAERHRDQSVENKD 778
>U58750-1|AAB00641.1| 307|Caenorhabditis elegans Hypothetical
protein F55G1.7 protein.
Length = 307
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 477 NNIRYNHAQIKEKVQRTQISKVLIANRGEIACR----VMRTAKKLGVRTV-AVYSDADRH 641
N++ NHAQ + ++ +S LI GE+ + T +KL +R V + D +
Sbjct: 192 NHLTINHAQFVKSLETVNMSTFLIRQEGELRAASFHIPLLTCQKLELRIVNPIEGDDESE 251
Query: 642 AMHV-EMADEAYHI 680
M + E E HI
Sbjct: 252 LMQIFEQIIENSHI 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,957,624
Number of Sequences: 27780
Number of extensions: 333701
Number of successful extensions: 848
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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