Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_E22
(451 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 59 8e-09
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 59 8e-09
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 59 8e-09
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 59 8e-09
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 59 8e-09
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 57 3e-08
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 56 4e-08
BC063596-1|AAH63596.1| 77|Homo sapiens PTPRK protein protein. 29 5.5
L07758-1|AAA65201.1| 501|Homo sapiens IEF SSP 9502 protein. 29 7.3
BC001652-1|AAH01652.1| 501|Homo sapiens PWP1 homolog (S. cerevi... 29 7.3
AK223162-1|BAD96882.1| 501|Homo sapiens nuclear phosphoprotein ... 29 7.3
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 29 9.7
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 29 9.7
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 29 9.7
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 29 9.7
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 29 9.7
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 29 9.7
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 29 9.7
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 29 9.7
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 58.8 bits (136), Expect = 8e-09
Identities = 31/82 (37%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +1
Query: 55 QAAAVAVAPYWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXX 228
+AA V V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 33 KAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEK 92
Query: 229 XXXXXXXXXXXSDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 93 KVEAKKEESEESDDDMGFGLFD 114
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 58.8 bits (136), Expect = 8e-09
Identities = 31/82 (37%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +1
Query: 55 QAAAVAVAPYWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXX 228
+AA V V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 33 KAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEK 92
Query: 229 XXXXXXXXXXXSDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 93 KVEAKKEESEESDDDMGFGLFD 114
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 58.8 bits (136), Expect = 8e-09
Identities = 31/82 (37%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +1
Query: 55 QAAAVAVAPYWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXX 228
+AA V V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 33 KAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEK 92
Query: 229 XXXXXXXXXXXSDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 93 KVEAKKEESEESDDDMGFGLFD 114
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 58.8 bits (136), Expect = 8e-09
Identities = 31/82 (37%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +1
Query: 55 QAAAVAVAPYWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXX 228
+AA V V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 33 KAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEK 92
Query: 229 XXXXXXXXXXXSDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 93 KVEAKKEESEESDDDMGFGLFD 114
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 58.8 bits (136), Expect = 8e-09
Identities = 31/82 (37%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +1
Query: 55 QAAAVAVAPYWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXX 228
+AA V V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 33 KAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEK 92
Query: 229 XXXXXXXXXXXSDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 93 KVEAKKEESEESDDDMGFGLFD 114
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 56.8 bits (131), Expect = 3e-08
Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +1
Query: 55 QAAAVAVAPYWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXX 228
+AA V V P+WPGLFAKAL +N+ LI ++G+G
Sbjct: 33 KAAGVNVEPFWPGLFAKALANVNIGSLICDVGAGGPAPAAGAAPAGGPAPSTAAAPAEEK 92
Query: 229 XXXXXXXXXXXSDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 93 KVEAKKEESEESDDDMGFGLFD 114
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 56.4 bits (130), Expect = 4e-08
Identities = 30/81 (37%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +1
Query: 55 QAAAVAVAPYWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXX 228
+AA V V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 33 KAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEK 92
Query: 229 XXXXXXXXXXXSDDDMGFGLF 291
SDDDMGFGLF
Sbjct: 93 KVEAKKEESEESDDDMGFGLF 113
>BC063596-1|AAH63596.1| 77|Homo sapiens PTPRK protein protein.
Length = 77
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 66 CSCSAILARSVRQSLGRHQCPXPDHQHRL 152
C CSA + S+R L R Q P DH+ RL
Sbjct: 44 CCCSAAVCHSIRH-LSRTQNPGQDHEGRL 71
>L07758-1|AAA65201.1| 501|Homo sapiens IEF SSP 9502 protein.
Length = 501
Score = 29.1 bits (62), Expect = 7.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 9 AAAVAVTGAQISTILSSGGCSCSAILARSVRQSLGRHQCPXPDHQHRLW 155
AA++AV ++ T L +++ S +S+ + C PD HR+W
Sbjct: 292 AASLAVHTDKVQT-LQFHPFEAQTLISGSYDKSVALYDCRSPDESHRMW 339
>BC001652-1|AAH01652.1| 501|Homo sapiens PWP1 homolog (S.
cerevisiae) protein.
Length = 501
Score = 29.1 bits (62), Expect = 7.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 9 AAAVAVTGAQISTILSSGGCSCSAILARSVRQSLGRHQCPXPDHQHRLW 155
AA++AV ++ T L +++ S +S+ + C PD HR+W
Sbjct: 292 AASLAVHTDKVQT-LQFHPFEAQTLISGSYDKSVALYDCRSPDESHRMW 339
>AK223162-1|BAD96882.1| 501|Homo sapiens nuclear phosphoprotein
similar to S. cerevisiae PWP1 variant protein.
Length = 501
Score = 29.1 bits (62), Expect = 7.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 9 AAAVAVTGAQISTILSSGGCSCSAILARSVRQSLGRHQCPXPDHQHRLW 155
AA++AV ++ T L +++ S +S+ + C PD HR+W
Sbjct: 292 AASLAVHTDKVQT-LQFHPFEAQTLISGSYDKSVALYDCRSPDESHRMW 339
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 262 SDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 262 SDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 262 SDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 262 SDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 262 SDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 262 SDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 262 SDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 262 SDDDMGFGLFD 294
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,915,238
Number of Sequences: 237096
Number of extensions: 580818
Number of successful extensions: 1284
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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