Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_E22
         (451 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...    74   8e-14
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...    74   8e-14
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...    74   8e-14
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...    72   4e-13
M63421-1|AAA28432.1|  249|Drosophila melanogaster csp32 protein.       25   5.0  
AF057167-2|AAD09428.1|  249|Drosophila melanogaster cysteine str...    25   5.0  
AE014296-3660|AAF51816.1|  249|Drosophila melanogaster CG6395-PB...    25   5.0  
AF057167-3|AAD09430.1|  228|Drosophila melanogaster cysteine str...    25   5.0  
AE014296-3661|AAN12195.2|  228|Drosophila melanogaster CG6395-PC...    25   5.0  
M63008-1|AAA28431.1|  223|Drosophila melanogaster csp29 protein.       25   5.0  
AF057167-4|AAD09431.1|  223|Drosophila melanogaster cysteine str...    25   5.0  
AE014296-3662|AAF51817.1|  223|Drosophila melanogaster CG6395-PA...    25   5.0  

>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score = 74.1 bits (174), Expect = 8e-14
 Identities = 40/80 (50%), Positives = 42/80 (52%)
 Frame = +1

Query: 55  QAAAVAVAPYWPGLFAKALEGINVRXLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXX 234
           +AA V V PYWPGLFAKALEGINV+ LITNIGSGV                         
Sbjct: 33  KAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEE 92

Query: 235 XXXXXXXXXSDDDMGFGLFD 294
                    SDDDMGFGLFD
Sbjct: 93  KKKEEESDQSDDDMGFGLFD 112


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score = 74.1 bits (174), Expect = 8e-14
 Identities = 40/80 (50%), Positives = 42/80 (52%)
 Frame = +1

Query: 55  QAAAVAVAPYWPGLFAKALEGINVRXLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXX 234
           +AA V V PYWPGLFAKALEGINV+ LITNIGSGV                         
Sbjct: 33  KAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEE 92

Query: 235 XXXXXXXXXSDDDMGFGLFD 294
                    SDDDMGFGLFD
Sbjct: 93  KKKEEESDQSDDDMGFGLFD 112


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score = 74.1 bits (174), Expect = 8e-14
 Identities = 40/80 (50%), Positives = 42/80 (52%)
 Frame = +1

Query: 55  QAAAVAVAPYWPGLFAKALEGINVRXLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXX 234
           +AA V V PYWPGLFAKALEGINV+ LITNIGSGV                         
Sbjct: 33  KAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEE 92

Query: 235 XXXXXXXXXSDDDMGFGLFD 294
                    SDDDMGFGLFD
Sbjct: 93  KKKEEESDQSDDDMGFGLFD 112


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score = 71.7 bits (168), Expect = 4e-13
 Identities = 39/80 (48%), Positives = 41/80 (51%)
 Frame = +1

Query: 55  QAAAVAVAPYWPGLFAKALEGINVRXLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXX 234
           +AA V V PYWPGLFAKALE INV+ LITNIGSGV                         
Sbjct: 33  KAANVEVEPYWPGLFAKALEAINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEE 92

Query: 235 XXXXXXXXXSDDDMGFGLFD 294
                    SDDDMGFGLFD
Sbjct: 93  KKKEEESDQSDDDMGFGLFD 112


>M63421-1|AAA28432.1|  249|Drosophila melanogaster csp32 protein.
          Length = 249

 Score = 24.6 bits (51), Expect(2) = 5.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 11  CCCCRXWCANF 43
           CCCC   C NF
Sbjct: 123 CCCCCCCCCNF 133



 Score = 22.2 bits (45), Expect(2) = 5.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 8   GCCCCRXWC 34
           GCCCC   C
Sbjct: 120 GCCCCCCCC 128


>AF057167-2|AAD09428.1|  249|Drosophila melanogaster cysteine string
           protein 1 protein.
          Length = 249

 Score = 24.6 bits (51), Expect(2) = 5.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 11  CCCCRXWCANF 43
           CCCC   C NF
Sbjct: 123 CCCCCCCCCNF 133



 Score = 22.2 bits (45), Expect(2) = 5.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 8   GCCCCRXWC 34
           GCCCC   C
Sbjct: 120 GCCCCCCCC 128


>AE014296-3660|AAF51816.1|  249|Drosophila melanogaster CG6395-PB,
           isoform B protein.
          Length = 249

 Score = 24.6 bits (51), Expect(2) = 5.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 11  CCCCRXWCANF 43
           CCCC   C NF
Sbjct: 123 CCCCCCCCCNF 133



 Score = 22.2 bits (45), Expect(2) = 5.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 8   GCCCCRXWC 34
           GCCCC   C
Sbjct: 120 GCCCCCCCC 128


>AF057167-3|AAD09430.1|  228|Drosophila melanogaster cysteine string
           protein 2 protein.
          Length = 228

 Score = 24.6 bits (51), Expect(2) = 5.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 11  CCCCRXWCANF 43
           CCCC   C NF
Sbjct: 123 CCCCCCCCCNF 133



 Score = 22.2 bits (45), Expect(2) = 5.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 8   GCCCCRXWC 34
           GCCCC   C
Sbjct: 120 GCCCCCCCC 128


>AE014296-3661|AAN12195.2|  228|Drosophila melanogaster CG6395-PC,
           isoform C protein.
          Length = 228

 Score = 24.6 bits (51), Expect(2) = 5.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 11  CCCCRXWCANF 43
           CCCC   C NF
Sbjct: 123 CCCCCCCCCNF 133



 Score = 22.2 bits (45), Expect(2) = 5.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 8   GCCCCRXWC 34
           GCCCC   C
Sbjct: 120 GCCCCCCCC 128


>M63008-1|AAA28431.1|  223|Drosophila melanogaster csp29 protein.
          Length = 223

 Score = 24.6 bits (51), Expect(2) = 5.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 11  CCCCRXWCANF 43
           CCCC   C NF
Sbjct: 123 CCCCCCCCCNF 133



 Score = 22.2 bits (45), Expect(2) = 5.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 8   GCCCCRXWC 34
           GCCCC   C
Sbjct: 120 GCCCCCCCC 128


>AF057167-4|AAD09431.1|  223|Drosophila melanogaster cysteine string
           protein 3 protein.
          Length = 223

 Score = 24.6 bits (51), Expect(2) = 5.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 11  CCCCRXWCANF 43
           CCCC   C NF
Sbjct: 123 CCCCCCCCCNF 133



 Score = 22.2 bits (45), Expect(2) = 5.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 8   GCCCCRXWC 34
           GCCCC   C
Sbjct: 120 GCCCCCCCC 128


>AE014296-3662|AAF51817.1|  223|Drosophila melanogaster CG6395-PA,
           isoform A protein.
          Length = 223

 Score = 24.6 bits (51), Expect(2) = 5.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 11  CCCCRXWCANF 43
           CCCC   C NF
Sbjct: 123 CCCCCCCCCNF 133



 Score = 22.2 bits (45), Expect(2) = 5.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 8   GCCCCRXWC 34
           GCCCC   C
Sbjct: 120 GCCCCCCCC 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,039,458
Number of Sequences: 53049
Number of extensions: 190341
Number of successful extensions: 605
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)