Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_E20
         (768 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069703-1|AAL39848.2|  266|Drosophila melanogaster LD47479p pro...    48   1e-05
AE014296-3108|AAF49187.1|  245|Drosophila melanogaster CG10419-P...    48   1e-05

>AY069703-1|AAL39848.2|  266|Drosophila melanogaster LD47479p
           protein.
          Length = 266

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
 Frame = +3

Query: 354 LDIVSPCFKISPDVQLKEVPTNGEEYLLKVIKERKNI-AAVTKCNKDYSKFAENQSQYVH 530
           L+I  P     P    ++ P +GEEYL+ +  ERK   A VTK +        N +  + 
Sbjct: 36  LEICEPDSSFDP----QKPPESGEEYLMHMFYERKRCPAVVTKRSSKIRNNTGNTTLEML 91

Query: 531 EFPRLSVPEKLKPTIEWQNMQVADFSETRMYISRLLSKRXXXXXXXXXXXXXPTCVIEWK 710
           + P L   + L PT EW++ QV  F   R  +  L  +               +   +WK
Sbjct: 92  DNPELPPFKCLLPTPEWRDEQVKSFQAARSQVLVLRKELANNNYDQSGEPPLTSDQEKWK 151

Query: 711 QFFSTHXPTLSCVLGL 758
           +F     P LS +L L
Sbjct: 152 EFCRNQQPLLSTLLHL 167


>AE014296-3108|AAF49187.1|  245|Drosophila melanogaster CG10419-PA
           protein.
          Length = 245

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
 Frame = +3

Query: 354 LDIVSPCFKISPDVQLKEVPTNGEEYLLKVIKERKNI-AAVTKCNKDYSKFAENQSQYVH 530
           L+I  P     P    ++ P +GEEYL+ +  ERK   A VTK +        N +  + 
Sbjct: 15  LEICEPDSSFDP----QKPPESGEEYLMHMFYERKRCPAVVTKRSSKIRNNTGNTTLEML 70

Query: 531 EFPRLSVPEKLKPTIEWQNMQVADFSETRMYISRLLSKRXXXXXXXXXXXXXPTCVIEWK 710
           + P L   + L PT EW++ QV  F   R  +  L  +               +   +WK
Sbjct: 71  DNPELPPFKCLLPTPEWRDEQVKSFQAARSQVLVLRKELANNNYDQSGEPPLTSDQEKWK 130

Query: 711 QFFSTHXPTLSCVLGL 758
           +F     P LS +L L
Sbjct: 131 EFCRNQQPLLSTLLHL 146


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,532,838
Number of Sequences: 53049
Number of extensions: 515385
Number of successful extensions: 1055
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)