Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_E17
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067216-11|AAL02458.1|  707|Caenorhabditis elegans Hypothetical...    27   9.6  

>AF067216-11|AAL02458.1|  707|Caenorhabditis elegans Hypothetical
           protein C35E7.2a protein.
          Length = 707

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +2

Query: 290 LILNLKSLLIRSEKVSINTFKXXXXXXXXXXXXXXXARNVRT-TRNVGSVLKKVLSRNVF 466
           ++LN  +L     K S+ T+                A  VR  T    ++++   + N+F
Sbjct: 199 VVLNKLTLHFEIIKCSVCTYDKNLELEYYDKKTKLYAETVRCETTEKFAIVRSAKNENIF 258

Query: 467 LSVYCTKYL 493
           LS YC K L
Sbjct: 259 LSTYCPKTL 267


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,983,508
Number of Sequences: 27780
Number of extensions: 203183
Number of successful extensions: 384
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)