Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_E16
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF426175-1|ABO26418.1|  155|Anopheles gambiae unknown protein.         24   5.4  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   5.4  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   5.4  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   5.4  
AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.       24   5.4  

>EF426175-1|ABO26418.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 445 FPSLLRRSLHRLGCHRLLENRSATDCTCSSCIVRST 552
           F +LL +S+  L C++     S +DC  S+  V  T
Sbjct: 16  FGALLAQSVSALRCYQCASPSSWSDCQASAQSVECT 51


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 324 LSISTLSGLVLFFLMTLLAFPQPPIITSYIG 232
           LSIS L  L +FFL+ +   P   ++   +G
Sbjct: 277 LSISILISLHVFFLLVVEIIPPTSLVVPLLG 307


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 324 LSISTLSGLVLFFLMTLLAFPQPPIITSYIG 232
           LSIS L  L +FFL+ +   P   ++   +G
Sbjct: 277 LSISILISLHVFFLLVVEIIPPTSLVVPLLG 307


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 324 LSISTLSGLVLFFLMTLLAFPQPPIITSYIG 232
           LSIS L  L +FFL+     P   ++   +G
Sbjct: 273 LSISILLSLTVFFLLLAEIIPPTSLVVPLLG 303


>AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.
          Length = 101

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 193 CPRRAHDRPARIGSYV*GDDWRLGKR 270
           C RR    PAR    +  D WR+G R
Sbjct: 11  CTRRNRTAPARNYDTIPIDRWRVGNR 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,020
Number of Sequences: 2352
Number of extensions: 14134
Number of successful extensions: 145
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)