Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_E14
(868 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3G9.16c |bet5|SPAC688.15|TRAPP complex subunit Bet5 |Schizos... 29 0.65
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 29 1.1
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 29 1.1
SPAC694.04c |||conserved eukaryotic protein|Schizosaccharomyces ... 28 1.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 2.0
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 27 2.6
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.5
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 3.5
SPCC1827.08c |pof7|SPCC70.11c|F-box protein Pof7|Schizosaccharom... 26 6.0
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 26 6.0
SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 6.0
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 26 6.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 6.0
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 26 6.0
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 26 6.0
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 26 8.0
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 26 8.0
SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|... 26 8.0
>SPAC3G9.16c |bet5|SPAC688.15|TRAPP complex subunit Bet5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 29.5 bits (63), Expect = 0.65
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +1
Query: 121 TTNPKNDHSTSYTTNIRLSTSTK-NIYSTTHTAPIYSTTNYTNFTIAIPTYLH 276
TT+ H TN+RL T I S TH TT Y F + P Y H
Sbjct: 74 TTSKYKLHFYETPTNLRLIFITNPKIDSLTHVLQQIYTTLYVEFVVKHPLYTH 126
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 293 RSSNTYTSYTPKPTWASSIDTTPS 364
+SS+T +S TP PT SSI TP+
Sbjct: 842 QSSSTTSSITPTPTTTSSITPTPT 865
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 115 HPTTNPKNDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTTNYTN 246
HP++ + +++TN+ + +T IYST+ ++ I TT Y+N
Sbjct: 137 HPSSERHKSTNDTWSTNLPTNPTTTAIYSTSGSSNI--TTPYSN 178
>SPAC694.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/95 (20%), Positives = 44/95 (46%)
Frame = +3
Query: 63 SCNLLIDLNQHIPQIKHTPHNQPKKRSLHKLHNKHTPLNLNKKYILHNPYSAHILHNQLH 242
SC++++D+ IK+ H+Q R + + L+ +++ + ++H L
Sbjct: 47 SCDIIVDVGGKYDGIKYFDHHQ---REFNDTFSPKYSTRLSSAGLIYKHFGREVIHAVLP 103
Query: 243 QFYNRNTNLLTQRLHKREVQTLTQVTLQNRHGLAA 347
Q +L T L+++ Q+ + N +G++A
Sbjct: 104 QLKINEQDLET--LYEKVYQSFVEGLDANDNGISA 136
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 82 TSTNISHKSNIHPTTNPKNDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTTNYTNFTIAI 261
TST+ S P T+ N ST++T++ +STS+ + +++ + S++ Y+N T +
Sbjct: 628 TSTSKVTSSTSIPLTST-NRTSTTFTSSTSISTSSSSTATSSTSFASESSSFYSNVTTSS 686
Query: 262 PT 267
T
Sbjct: 687 ST 688
Score = 27.5 bits (58), Expect = 2.6
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +1
Query: 79 STSTNISHKSN----IHPTTNPKNDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTTNYTN 246
+TST+I N + PT P + + TTN STS ST T+ +TTN T
Sbjct: 394 TTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVP-YTSTPVTSTPLATTNCTT 452
Query: 247 FT 252
T
Sbjct: 453 ST 454
Score = 26.6 bits (56), Expect = 4.6
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +1
Query: 76 LSTSTNISHKSNIHPTTNPKNDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTTNYT--NF 249
+S+ST ++ S TTN S YT+ ST TT T+ Y++T T N+
Sbjct: 516 ISSSTPVT--STPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNY 573
Query: 250 TIAIPT 267
TI+ T
Sbjct: 574 TISSST 579
Score = 25.8 bits (54), Expect = 8.0
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 121 TTNPKNDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTTNYT--NFTIAIPT 267
TTN S YT+ ST TT T+ Y++T T N+TI+ T
Sbjct: 470 TTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSST 520
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 27.5 bits (58), Expect = 2.6
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 73 YLSTSTN--ISHKSNIHPTTNPKNDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTTNYTN 246
Y++ TN + + I+PT+N ++ S +Y S S+ +I S + ST++ T
Sbjct: 43 YITIYTNGPVPGTTTIYPTSNVASNTSENYPYTGSKSLSSSSILSNS----TISTSSSTP 98
Query: 247 FTIAIPT 267
T ++PT
Sbjct: 99 ITASVPT 105
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 127 NPKNDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTTNYTNFTIA 258
N ++++YT + STST N + +Y T + TN +I+
Sbjct: 120 NSVTGYASNYTQSSSNSTSTMNSTGSVSGGSVYPTNSTTNSSIS 163
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/64 (29%), Positives = 36/64 (56%)
Frame = +1
Query: 76 LSTSTNISHKSNIHPTTNPKNDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTTNYTNFTI 255
L TS S + + +++ + + SY+TN+ + ST +TT +A + S+ Y+N ++
Sbjct: 245 LPTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTTGST----TTTGSATVSSSPFYSNSSV 300
Query: 256 AIPT 267
IPT
Sbjct: 301 -IPT 303
>SPCC1827.08c |pof7|SPCC70.11c|F-box protein
Pof7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 361
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 223 YSTTNYTNFTIAIPTYLHRDY 285
YS NYT+FT +P +RDY
Sbjct: 323 YSIHNYTSFTNEMPLTHNRDY 343
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 79 STSTNISHKSNIHPTTNPKNDHSTS 153
S S + H SN HP + K+ H TS
Sbjct: 69 SDSDSPHHASNPHPNSRQKHQHQTS 93
>SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 230
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +1
Query: 79 STSTNISHKSNIHPTTNPKNDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTTNYTNFTIA 258
S+S++IS + P+T+ + STS +++ S T + S ++ ST N + ++
Sbjct: 58 SSSSSISTSHDSQPSTSSSSPSSTSTSSSSGTSVITASDVSASNEIISSSTNNSIHQQVS 117
Query: 259 IPT 267
+ T
Sbjct: 118 VVT 120
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 85 STNISHKSNIHPTTNPKNDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTT 234
+T+++ + + PTT+ TT + T Y+TT T ++T+
Sbjct: 137 TTHVNTTTVVPPTTHANTTSFVPTTTESSIHPITTGFYNTTFTTGYFNTS 186
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 85 STNISHKSNIHPTTNPKNDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTTNYTNFTIAI 261
S S +S + ++ S +++ +STS+ N Y+T+ AP S+T ++ T ++
Sbjct: 775 SATASSQSQLTNSSTLATSLYLSSSSSRTISTSSTNEYNTSFHAPTVSSTTSSSSTTSL 833
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 76 LSTSTNISHKSNIHPTTNPK-NDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTT 234
LS ST HK ++ NP+ + S +T N RL++S+ +P ++T+
Sbjct: 46 LSRSTFQFHKHHLSGNENPQPSSESPYFTNNERLNSSSFPQIHDNQLSPSFNTS 99
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 26.2 bits (55), Expect = 6.0
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +1
Query: 118 PTTNPKNDHSTSYTTNIRLSTSTKNIYSTTHTAPIYSTTNYTNFTIAIPTYLHRDYTREK 297
P+TN K + SY + LS T + + + S TN+ + P YL +
Sbjct: 66 PSTNGKTNVLPSYASTPSLSPMTSSHFPYASDGTLISATNHCDDCSYNPHYLPVNSNGSS 125
Query: 298 FKHLHKLHS 324
H L S
Sbjct: 126 PSHTSSLDS 134
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 25.8 bits (54), Expect = 8.0
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 11/83 (13%)
Frame = +3
Query: 75 LIDLNQHIPQIKHTPHNQPKKRSLHKLHNKHTPLNLNKKYILHNPYSAHILHNQLHQFYN 254
L DL +K P + +L K+ + + + + HNP+ + L +FY
Sbjct: 1157 LEDLQSLYKDVKLLPFQPKETETLRKVVDLASKFRQEMQALAHNPFGLTMAEVPLARFYL 1216
Query: 255 R-----------NTNLLTQRLHK 290
R TNL Q+LH+
Sbjct: 1217 RKMEGAEILLVDETNLFRQKLHE 1239
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 524 VDSNFERSYLPNKTNLVPTEEEHKKKNIAVRFSD 423
+D NFE S L TNL + K+ + FSD
Sbjct: 773 LDINFEISILQKATNLTKFKVSSHMKHAEIMFSD 806
>SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 4/33 (12%)
Frame = +3
Query: 144 LHK-LHNK--HTPLN-LNKKYILHNPYSAHILH 230
+H+ LH++ + PL+ L+ K+I+ PYS+H H
Sbjct: 169 IHRALHHRWLYAPLHKLHHKWIVPTPYSSHAFH 201
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,162,956
Number of Sequences: 5004
Number of extensions: 64892
Number of successful extensions: 308
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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