Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_E10
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    28   0.082
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    27   0.14 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.4  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 28.3 bits (60), Expect = 0.082
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
 Frame = +2

Query: 323 TELPKEAEFDADHNASDNEE-DKESDTDSIDEEHLK---DDEVALTDDQKAE 466
           TEL      D      + EE DK+ D DSID   L    DD + + DD K E
Sbjct: 306 TELSTGMNDDIPPETEEEEENDKKLDLDSIDMMQLPIQLDDGIDILDDVKCE 357


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 356 DHNA--SDNEEDKESDTDSIDEEHLKDDEVALTDDQKAERLIMAEELKQAGNNSYKCGEY 529
           DHN   S N      DT+ +++  ++ D     +D+K E  I+ + L+   N+ ++C   
Sbjct: 56  DHNKEKSKNNHHCNQDTEKLNQLEIESDNSKEVNDKKEENFIV-DRLR---NDLFECENK 111

Query: 530 ERS 538
           E+S
Sbjct: 112 EKS 114


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 332 PKEAEFDADHNASDNEEDK 388
           PKE   D D + SDNE  K
Sbjct: 81  PKEETDDKDDDESDNENIK 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,365
Number of Sequences: 438
Number of extensions: 3885
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)